Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
C11orf42Q8N5U0 GOLGA8DP-202ENST00000341390 2184 ntBASIC12.98□□□□□ -0.33
C11orf42Q8N5U0 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
C11orf42Q8N5U0 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
C11orf42Q8N5U0 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
C11orf42Q8N5U0 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC12.98□□□□□ -0.33
C11orf42Q8N5U0 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC12.98□□□□□ -0.33
C11orf42Q8N5U0 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
C11orf42Q8N5U0 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC12.98□□□□□ -0.33
C11orf42Q8N5U0 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
C11orf42Q8N5U0 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
C11orf42Q8N5U0 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
C11orf42Q8N5U0 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
C11orf42Q8N5U0 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC12.98□□□□□ -0.33
C11orf42Q8N5U0 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
C11orf42Q8N5U0 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
C11orf42Q8N5U0 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
C11orf42Q8N5U0 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
C11orf42Q8N5U0 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
C11orf42Q8N5U0 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
C11orf42Q8N5U0 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
C11orf42Q8N5U0 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC12.98□□□□□ -0.33
C11orf42Q8N5U0 FAM8A3P-201ENST00000427218 844 ntBASIC12.98□□□□□ -0.33
C11orf42Q8N5U0 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC12.98□□□□□ -0.33
C11orf42Q8N5U0 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC12.98□□□□□ -0.33
C11orf42Q8N5U0 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC12.98□□□□□ -0.33
C11orf42Q8N5U0 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC12.98□□□□□ -0.33
C11orf42Q8N5U0 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
C11orf42Q8N5U0 REEP4-207ENST00000523293 913 ntTSL 3 BASIC12.98□□□□□ -0.33
C11orf42Q8N5U0 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC12.98□□□□□ -0.33
C11orf42Q8N5U0 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC12.98□□□□□ -0.33
C11orf42Q8N5U0 AC011467.4-201ENST00000594891 528 ntBASIC12.98□□□□□ -0.33
C11orf42Q8N5U0 LINC01115-203ENST00000606068 577 ntBASIC12.98□□□□□ -0.33
C11orf42Q8N5U0 AC004790.1-201ENST00000612686 536 ntBASIC12.98□□□□□ -0.33
C11orf42Q8N5U0 5S_rRNA.22-201ENST00000614916 106 ntBASIC12.98□□□□□ -0.33
C11orf42Q8N5U0 AF228730.6-201ENST00000641497 218 ntBASIC12.98□□□□□ -0.33
C11orf42Q8N5U0 AC084121.3-201ENST00000641716 218 ntBASIC12.98□□□□□ -0.33
C11orf42Q8N5U0 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC12.98□□□□□ -0.33
C11orf42Q8N5U0 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC12.98□□□□□ -0.33
C11orf42Q8N5U0 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC12.98□□□□□ -0.33
C11orf42Q8N5U0 PRAL-201ENST00000624952 3286 ntBASIC12.98□□□□□ -0.33
C11orf42Q8N5U0 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
C11orf42Q8N5U0 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
C11orf42Q8N5U0 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
C11orf42Q8N5U0 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
C11orf42Q8N5U0 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC12.98□□□□□ -0.33
C11orf42Q8N5U0 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
C11orf42Q8N5U0 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
C11orf42Q8N5U0 HLA-DQB2-231ENST00000435145 2026 ntBASIC12.98□□□□□ -0.33
C11orf42Q8N5U0 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
C11orf42Q8N5U0 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC12.98□□□□□ -0.33
C11orf42Q8N5U0 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC12.98□□□□□ -0.33
C11orf42Q8N5U0 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
C11orf42Q8N5U0 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC12.98□□□□□ -0.33
C11orf42Q8N5U0 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
C11orf42Q8N5U0 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
C11orf42Q8N5U0 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC12.97□□□□□ -0.33
C11orf42Q8N5U0 KCP-203ENST00000610776 5108 ntTSL 5 BASIC12.97□□□□□ -0.33
C11orf42Q8N5U0 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC12.97□□□□□ -0.33
C11orf42Q8N5U0 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
C11orf42Q8N5U0 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC12.97□□□□□ -0.33
C11orf42Q8N5U0 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
C11orf42Q8N5U0 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
C11orf42Q8N5U0 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
C11orf42Q8N5U0 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
C11orf42Q8N5U0 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
C11orf42Q8N5U0 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC12.97□□□□□ -0.33
C11orf42Q8N5U0 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
C11orf42Q8N5U0 TKT-202ENST00000423516 2075 ntTSL 2 BASIC12.97□□□□□ -0.33
C11orf42Q8N5U0 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
C11orf42Q8N5U0 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
C11orf42Q8N5U0 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
C11orf42Q8N5U0 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
C11orf42Q8N5U0 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
C11orf42Q8N5U0 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
C11orf42Q8N5U0 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
C11orf42Q8N5U0 HNRNPA1P40-201ENST00000426371 1278 ntBASIC12.97□□□□□ -0.33
C11orf42Q8N5U0 RASL12-203ENST00000434605 982 ntTSL 2 BASIC12.97□□□□□ -0.33
C11orf42Q8N5U0 KRT18P64-201ENST00000434946 1219 ntBASIC12.97□□□□□ -0.33
C11orf42Q8N5U0 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC12.97□□□□□ -0.33
C11orf42Q8N5U0 TSPY16P-201ENST00000449843 468 ntBASIC12.97□□□□□ -0.33
C11orf42Q8N5U0 TMPRSS11CP-201ENST00000453277 683 ntBASIC12.97□□□□□ -0.33
C11orf42Q8N5U0 MDH2-205ENST00000461263 648 ntTSL 2 BASIC12.97□□□□□ -0.33
C11orf42Q8N5U0 SPDYE18-201ENST00000510091 1050 ntBASIC12.97□□□□□ -0.33
C11orf42Q8N5U0 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC12.97□□□□□ -0.33
C11orf42Q8N5U0 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC12.97□□□□□ -0.33
C11orf42Q8N5U0 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
C11orf42Q8N5U0 AC135586.1-201ENST00000539323 574 ntBASIC12.97□□□□□ -0.33
C11orf42Q8N5U0 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
C11orf42Q8N5U0 AC092337.1-201ENST00000568699 1129 ntBASIC12.97□□□□□ -0.33
C11orf42Q8N5U0 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC12.97□□□□□ -0.33
C11orf42Q8N5U0 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
C11orf42Q8N5U0 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC12.97□□□□□ -0.33
C11orf42Q8N5U0 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC12.97□□□□□ -0.33
C11orf42Q8N5U0 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC12.97□□□□□ -0.33
C11orf42Q8N5U0 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
C11orf42Q8N5U0 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC12.97□□□□□ -0.33
C11orf42Q8N5U0 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
C11orf42Q8N5U0 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC12.97□□□□□ -0.33
C11orf42Q8N5U0 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms