Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 AC022532.1-201ENST00000624563 1728 ntBASIC16.3■□□□□ 0.2
CCDC33Q8N5R6 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.3■□□□□ 0.2
CCDC33Q8N5R6 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.3■□□□□ 0.2
CCDC33Q8N5R6 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC33Q8N5R6 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC33Q8N5R6 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC16.3■□□□□ 0.2
CCDC33Q8N5R6 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC33Q8N5R6 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CCDC33Q8N5R6 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC33Q8N5R6 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC16.29■□□□□ 0.2
CCDC33Q8N5R6 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC33Q8N5R6 CLK3P2-201ENST00000427566 1453 ntBASIC16.29■□□□□ 0.2
CCDC33Q8N5R6 CELP-203ENST00000624767 2414 ntTSL 5 BASIC16.29■□□□□ 0.2
CCDC33Q8N5R6 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC33Q8N5R6 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CCDC33Q8N5R6 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC33Q8N5R6 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC33Q8N5R6 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CCDC33Q8N5R6 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC33Q8N5R6 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CCDC33Q8N5R6 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.29■□□□□ 0.2
CCDC33Q8N5R6 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CCDC33Q8N5R6 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CCDC33Q8N5R6 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
CCDC33Q8N5R6 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC33Q8N5R6 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
CCDC33Q8N5R6 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC16.29■□□□□ 0.2
CCDC33Q8N5R6 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC16.29■□□□□ 0.2
CCDC33Q8N5R6 RPS2P32-201ENST00000439199 892 ntBASIC16.29■□□□□ 0.2
CCDC33Q8N5R6 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC16.29■□□□□ 0.2
CCDC33Q8N5R6 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC16.29■□□□□ 0.2
CCDC33Q8N5R6 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.29■□□□□ 0.2
CCDC33Q8N5R6 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.29■□□□□ 0.2
CCDC33Q8N5R6 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC16.29■□□□□ 0.2
CCDC33Q8N5R6 NEU3-203ENST00000529024 581 ntTSL 3 BASIC16.29■□□□□ 0.2
CCDC33Q8N5R6 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC16.29■□□□□ 0.2
CCDC33Q8N5R6 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC16.29■□□□□ 0.2
CCDC33Q8N5R6 AC092337.1-201ENST00000568699 1129 ntBASIC16.29■□□□□ 0.2
CCDC33Q8N5R6 NAA38-206ENST00000576384 424 ntTSL 2 BASIC16.29■□□□□ 0.2
CCDC33Q8N5R6 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CCDC33Q8N5R6 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC33Q8N5R6 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC33Q8N5R6 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CCDC33Q8N5R6 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC33Q8N5R6 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
CCDC33Q8N5R6 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC33Q8N5R6 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC33Q8N5R6 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
CCDC33Q8N5R6 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CCDC33Q8N5R6 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC33Q8N5R6 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC33Q8N5R6 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC33Q8N5R6 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC33Q8N5R6 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC33Q8N5R6 AC087481.3-201ENST00000602886 1894 ntBASIC16.29■□□□□ 0.2
CCDC33Q8N5R6 AL136379.1-201ENST00000623471 2642 ntBASIC16.29■□□□□ 0.2
CCDC33Q8N5R6 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC16.29■□□□□ 0.2
CCDC33Q8N5R6 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC33Q8N5R6 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC33Q8N5R6 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC33Q8N5R6 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CCDC33Q8N5R6 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC33Q8N5R6 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC33Q8N5R6 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC16.28■□□□□ 0.2
CCDC33Q8N5R6 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC33Q8N5R6 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC33Q8N5R6 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC33Q8N5R6 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC33Q8N5R6 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CCDC33Q8N5R6 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC33Q8N5R6 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC33Q8N5R6 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC33Q8N5R6 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC16.28■□□□□ 0.2
CCDC33Q8N5R6 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC33Q8N5R6 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC16.28■□□□□ 0.2
CCDC33Q8N5R6 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC33Q8N5R6 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC33Q8N5R6 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.28■□□□□ 0.2
CCDC33Q8N5R6 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC16.28■□□□□ 0.2
CCDC33Q8N5R6 APOC4-201ENST00000591600 348 ntTSL 3 BASIC16.28■□□□□ 0.2
CCDC33Q8N5R6 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC16.28■□□□□ 0.2
CCDC33Q8N5R6 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC33Q8N5R6 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC16.28■□□□□ 0.2
CCDC33Q8N5R6 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC33Q8N5R6 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC16.28■□□□□ 0.2
CCDC33Q8N5R6 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CCDC33Q8N5R6 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC33Q8N5R6 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.28■□□□□ 0.2
CCDC33Q8N5R6 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC16.28■□□□□ 0.2
CCDC33Q8N5R6 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC16.28■□□□□ 0.2
CCDC33Q8N5R6 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC33Q8N5R6 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
CCDC33Q8N5R6 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC33Q8N5R6 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC33Q8N5R6 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC33Q8N5R6 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC33Q8N5R6 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC33Q8N5R6 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC33Q8N5R6 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CCDC33Q8N5R6 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms