Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEFF1Q8IYR6 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC15.31■□□□□ 0.04
TMEFF1Q8IYR6 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TMEFF1Q8IYR6 AC025181.2-201ENST00000606994 802 ntBASIC15.31■□□□□ 0.04
TMEFF1Q8IYR6 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEFF1Q8IYR6 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEFF1Q8IYR6 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEFF1Q8IYR6 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEFF1Q8IYR6 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEFF1Q8IYR6 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEFF1Q8IYR6 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.31■□□□□ 0.04
TMEFF1Q8IYR6 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEFF1Q8IYR6 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEFF1Q8IYR6 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEFF1Q8IYR6 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TMEFF1Q8IYR6 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TMEFF1Q8IYR6 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.31■□□□□ 0.04
TMEFF1Q8IYR6 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEFF1Q8IYR6 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TMEFF1Q8IYR6 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEFF1Q8IYR6 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TMEFF1Q8IYR6 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TMEFF1Q8IYR6 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEFF1Q8IYR6 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.31■□□□□ 0.04
TMEFF1Q8IYR6 DOC2GP-204ENST00000639052 2548 ntBASIC15.31■□□□□ 0.04
TMEFF1Q8IYR6 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TMEFF1Q8IYR6 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEFF1Q8IYR6 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TMEFF1Q8IYR6 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEFF1Q8IYR6 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEFF1Q8IYR6 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
TMEFF1Q8IYR6 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TMEFF1Q8IYR6 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEFF1Q8IYR6 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEFF1Q8IYR6 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEFF1Q8IYR6 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEFF1Q8IYR6 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEFF1Q8IYR6 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEFF1Q8IYR6 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEFF1Q8IYR6 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
TMEFF1Q8IYR6 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
TMEFF1Q8IYR6 TISP43-201ENST00000409793 538 ntTSL 4 BASIC15.3■□□□□ 0.04
TMEFF1Q8IYR6 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TMEFF1Q8IYR6 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC15.3■□□□□ 0.04
TMEFF1Q8IYR6 HSPB1P2-201ENST00000448722 546 ntBASIC15.3■□□□□ 0.04
TMEFF1Q8IYR6 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC15.3■□□□□ 0.04
TMEFF1Q8IYR6 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
TMEFF1Q8IYR6 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TMEFF1Q8IYR6 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.3■□□□□ 0.04
TMEFF1Q8IYR6 AC126915.1-201ENST00000522847 1038 ntBASIC15.3■□□□□ 0.04
TMEFF1Q8IYR6 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC15.3■□□□□ 0.04
TMEFF1Q8IYR6 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
TMEFF1Q8IYR6 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC15.3■□□□□ 0.04
TMEFF1Q8IYR6 NDUFV2P1-201ENST00000596415 907 ntBASIC15.3■□□□□ 0.04
TMEFF1Q8IYR6 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
TMEFF1Q8IYR6 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
TMEFF1Q8IYR6 AC015967.2-201ENST00000624092 234 ntBASIC15.3■□□□□ 0.04
TMEFF1Q8IYR6 AC006435.4-201ENST00000625037 234 ntBASIC15.3■□□□□ 0.04
TMEFF1Q8IYR6 AL356737.1-201ENST00000634391 234 ntBASIC15.3■□□□□ 0.04
TMEFF1Q8IYR6 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC15.3■□□□□ 0.04
TMEFF1Q8IYR6 HYMAI-201ENST00000635591 3347 ntBASIC15.3■□□□□ 0.04
TMEFF1Q8IYR6 AMT-224ENST00000635808 1610 ntTSL 5 BASIC15.3■□□□□ 0.04
TMEFF1Q8IYR6 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEFF1Q8IYR6 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEFF1Q8IYR6 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TMEFF1Q8IYR6 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
TMEFF1Q8IYR6 PCDHA1-201ENST00000378133 2726 ntBASIC15.3■□□□□ 0.04
TMEFF1Q8IYR6 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
TMEFF1Q8IYR6 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
TMEFF1Q8IYR6 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
TMEFF1Q8IYR6 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.29■□□□□ 0.04
TMEFF1Q8IYR6 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC15.29■□□□□ 0.04
TMEFF1Q8IYR6 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.29■□□□□ 0.04
TMEFF1Q8IYR6 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
TMEFF1Q8IYR6 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.29■□□□□ 0.04
TMEFF1Q8IYR6 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TMEFF1Q8IYR6 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TMEFF1Q8IYR6 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.29■□□□□ 0.04
TMEFF1Q8IYR6 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TMEFF1Q8IYR6 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
TMEFF1Q8IYR6 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.29■□□□□ 0.04
TMEFF1Q8IYR6 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TMEFF1Q8IYR6 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
TMEFF1Q8IYR6 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.29■□□□□ 0.04
TMEFF1Q8IYR6 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TMEFF1Q8IYR6 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TMEFF1Q8IYR6 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TMEFF1Q8IYR6 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
TMEFF1Q8IYR6 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC15.29■□□□□ 0.04
TMEFF1Q8IYR6 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC15.29■□□□□ 0.04
TMEFF1Q8IYR6 NUS1P3-201ENST00000423502 862 ntBASIC15.29■□□□□ 0.04
TMEFF1Q8IYR6 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC15.29■□□□□ 0.04
TMEFF1Q8IYR6 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TMEFF1Q8IYR6 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC15.29■□□□□ 0.04
TMEFF1Q8IYR6 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC15.29■□□□□ 0.04
TMEFF1Q8IYR6 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC15.29■□□□□ 0.04
TMEFF1Q8IYR6 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TMEFF1Q8IYR6 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC15.29■□□□□ 0.04
TMEFF1Q8IYR6 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TMEFF1Q8IYR6 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms