Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC18.23■□□□□ 0.51
CCDC83Q8IWF9 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC83Q8IWF9 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC83Q8IWF9 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CCDC83Q8IWF9 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CCDC83Q8IWF9 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
CCDC83Q8IWF9 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC83Q8IWF9 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC83Q8IWF9 TP73-209ENST00000603362 1668 ntTSL 5 BASIC18.22■□□□□ 0.51
CCDC83Q8IWF9 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CCDC83Q8IWF9 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC18.22■□□□□ 0.51
CCDC83Q8IWF9 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC83Q8IWF9 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC83Q8IWF9 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC18.22■□□□□ 0.51
CCDC83Q8IWF9 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CCDC83Q8IWF9 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CCDC83Q8IWF9 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC83Q8IWF9 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC83Q8IWF9 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC83Q8IWF9 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
CCDC83Q8IWF9 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC83Q8IWF9 KRT18P13-201ENST00000400056 1290 ntBASIC18.22■□□□□ 0.51
CCDC83Q8IWF9 CENPM-205ENST00000404067 905 ntTSL 3 BASIC18.22■□□□□ 0.51
CCDC83Q8IWF9 CENPM-206ENST00000407253 818 ntTSL 2 BASIC18.22■□□□□ 0.51
CCDC83Q8IWF9 AC015922.1-201ENST00000421102 1152 ntBASIC18.22■□□□□ 0.51
CCDC83Q8IWF9 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC83Q8IWF9 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC18.22■□□□□ 0.51
CCDC83Q8IWF9 AC051619.7-201ENST00000568314 623 ntBASIC18.22■□□□□ 0.51
CCDC83Q8IWF9 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC18.22■□□□□ 0.51
CCDC83Q8IWF9 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC83Q8IWF9 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC18.22■□□□□ 0.51
CCDC83Q8IWF9 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC83Q8IWF9 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC83Q8IWF9 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC18.22■□□□□ 0.51
CCDC83Q8IWF9 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC83Q8IWF9 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC83Q8IWF9 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC83Q8IWF9 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC83Q8IWF9 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC18.22■□□□□ 0.51
CCDC83Q8IWF9 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC83Q8IWF9 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC18.22■□□□□ 0.51
CCDC83Q8IWF9 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC83Q8IWF9 TUBB3P1-201ENST00000405796 1332 ntBASIC18.22■□□□□ 0.51
CCDC83Q8IWF9 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC83Q8IWF9 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC83Q8IWF9 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
CCDC83Q8IWF9 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC83Q8IWF9 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC83Q8IWF9 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC18.22■□□□□ 0.51
CCDC83Q8IWF9 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC18.22■□□□□ 0.51
CCDC83Q8IWF9 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC18.22■□□□□ 0.51
CCDC83Q8IWF9 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC83Q8IWF9 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC83Q8IWF9 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC83Q8IWF9 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CCDC83Q8IWF9 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC18.21■□□□□ 0.51
CCDC83Q8IWF9 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CCDC83Q8IWF9 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC18.21■□□□□ 0.51
CCDC83Q8IWF9 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC83Q8IWF9 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC83Q8IWF9 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC83Q8IWF9 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC83Q8IWF9 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC83Q8IWF9 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC83Q8IWF9 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC18.21■□□□□ 0.51
CCDC83Q8IWF9 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC18.21■□□□□ 0.51
CCDC83Q8IWF9 GHSR-202ENST00000427970 912 ntBASIC18.21■□□□□ 0.51
CCDC83Q8IWF9 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC18.21■□□□□ 0.51
CCDC83Q8IWF9 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC18.21■□□□□ 0.51
CCDC83Q8IWF9 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC18.21■□□□□ 0.51
CCDC83Q8IWF9 RN7SL618P-201ENST00000477850 296 ntBASIC18.21■□□□□ 0.51
CCDC83Q8IWF9 AC125807.1-201ENST00000483097 614 ntBASIC18.21■□□□□ 0.51
CCDC83Q8IWF9 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC18.21■□□□□ 0.51
CCDC83Q8IWF9 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CCDC83Q8IWF9 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC18.21■□□□□ 0.51
CCDC83Q8IWF9 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC18.21■□□□□ 0.51
CCDC83Q8IWF9 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC83Q8IWF9 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
CCDC83Q8IWF9 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC83Q8IWF9 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC83Q8IWF9 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC83Q8IWF9 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC83Q8IWF9 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC83Q8IWF9 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC83Q8IWF9 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC83Q8IWF9 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC83Q8IWF9 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
CCDC83Q8IWF9 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC18.21■□□□□ 0.51
CCDC83Q8IWF9 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC83Q8IWF9 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC18.21■□□□□ 0.51
CCDC83Q8IWF9 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
CCDC83Q8IWF9 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC18.21■□□□□ 0.5
CCDC83Q8IWF9 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
CCDC83Q8IWF9 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC18.21■□□□□ 0.5
CCDC83Q8IWF9 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.5
CCDC83Q8IWF9 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC83Q8IWF9 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC83Q8IWF9 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC83Q8IWF9 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC18.2■□□□□ 0.5
CCDC83Q8IWF9 AL390755.1-201ENST00000623716 2027 ntBASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms