Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC13.76□□□□□ -0.21
LINC00346Q8IVM7 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00346Q8IVM7 AL512361.1-201ENST00000554200 418 ntBASIC13.76□□□□□ -0.21
LINC00346Q8IVM7 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC13.76□□□□□ -0.21
LINC00346Q8IVM7 AC004449.1-201ENST00000564240 433 ntBASIC13.76□□□□□ -0.21
LINC00346Q8IVM7 AC025048.3-201ENST00000590609 569 ntBASIC13.76□□□□□ -0.21
LINC00346Q8IVM7 WDR88-203ENST00000592765 651 ntTSL 5 BASIC13.76□□□□□ -0.21
LINC00346Q8IVM7 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00346Q8IVM7 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00346Q8IVM7 AL138828.2-201ENST00000615812 383 ntBASIC13.76□□□□□ -0.21
LINC00346Q8IVM7 AC005702.4-201ENST00000618393 416 ntBASIC13.76□□□□□ -0.21
LINC00346Q8IVM7 AL136317.3-201ENST00000618497 906 ntBASIC13.76□□□□□ -0.21
LINC00346Q8IVM7 GPER1-207ENST00000619052 571 ntTSL 2 BASIC13.76□□□□□ -0.21
LINC00346Q8IVM7 AF228730.6-201ENST00000641497 218 ntBASIC13.76□□□□□ -0.21
LINC00346Q8IVM7 AC084121.3-201ENST00000641716 218 ntBASIC13.76□□□□□ -0.21
LINC00346Q8IVM7 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
LINC00346Q8IVM7 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00346Q8IVM7 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00346Q8IVM7 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00346Q8IVM7 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
LINC00346Q8IVM7 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
LINC00346Q8IVM7 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00346Q8IVM7 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00346Q8IVM7 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
LINC00346Q8IVM7 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00346Q8IVM7 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00346Q8IVM7 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00346Q8IVM7 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC13.75□□□□□ -0.21
LINC00346Q8IVM7 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00346Q8IVM7 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00346Q8IVM7 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00346Q8IVM7 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00346Q8IVM7 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00346Q8IVM7 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00346Q8IVM7 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
LINC00346Q8IVM7 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC13.75□□□□□ -0.21
LINC00346Q8IVM7 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
LINC00346Q8IVM7 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC13.75□□□□□ -0.21
LINC00346Q8IVM7 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00346Q8IVM7 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00346Q8IVM7 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
LINC00346Q8IVM7 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC13.75□□□□□ -0.21
LINC00346Q8IVM7 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC13.75□□□□□ -0.21
LINC00346Q8IVM7 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC13.75□□□□□ -0.21
LINC00346Q8IVM7 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC13.75□□□□□ -0.21
LINC00346Q8IVM7 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00346Q8IVM7 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
LINC00346Q8IVM7 FO538757.1-201ENST00000623083 1397 ntBASIC13.75□□□□□ -0.21
LINC00346Q8IVM7 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
LINC00346Q8IVM7 TUBB3P1-201ENST00000405796 1332 ntBASIC13.75□□□□□ -0.21
LINC00346Q8IVM7 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00346Q8IVM7 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00346Q8IVM7 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC13.75□□□□□ -0.21
LINC00346Q8IVM7 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00346Q8IVM7 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
LINC00346Q8IVM7 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00346Q8IVM7 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.75□□□□□ -0.21
LINC00346Q8IVM7 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00346Q8IVM7 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC13.75□□□□□ -0.21
LINC00346Q8IVM7 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
LINC00346Q8IVM7 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
LINC00346Q8IVM7 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00346Q8IVM7 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00346Q8IVM7 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
LINC00346Q8IVM7 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC13.75□□□□□ -0.21
LINC00346Q8IVM7 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00346Q8IVM7 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC13.75□□□□□ -0.21
LINC00346Q8IVM7 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
LINC00346Q8IVM7 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
LINC00346Q8IVM7 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00346Q8IVM7 COQ4-205ENST00000609948 956 ntTSL 2 BASIC13.75□□□□□ -0.21
LINC00346Q8IVM7 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC13.75□□□□□ -0.21
LINC00346Q8IVM7 TEX28P1-201ENST00000613479 1221 ntBASIC13.75□□□□□ -0.21
LINC00346Q8IVM7 TEX28P2-201ENST00000617764 1221 ntBASIC13.75□□□□□ -0.21
LINC00346Q8IVM7 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC13.75□□□□□ -0.21
LINC00346Q8IVM7 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00346Q8IVM7 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00346Q8IVM7 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
LINC00346Q8IVM7 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00346Q8IVM7 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00346Q8IVM7 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
LINC00346Q8IVM7 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.75□□□□□ -0.21
LINC00346Q8IVM7 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
LINC00346Q8IVM7 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
LINC00346Q8IVM7 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00346Q8IVM7 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00346Q8IVM7 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00346Q8IVM7 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00346Q8IVM7 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00346Q8IVM7 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00346Q8IVM7 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00346Q8IVM7 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
LINC00346Q8IVM7 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00346Q8IVM7 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
LINC00346Q8IVM7 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00346Q8IVM7 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00346Q8IVM7 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00346Q8IVM7 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00346Q8IVM7 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00346Q8IVM7 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms