Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
RFX6Q8HWS3 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RFX6Q8HWS3 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
RFX6Q8HWS3 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RFX6Q8HWS3 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RFX6Q8HWS3 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RFX6Q8HWS3 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RFX6Q8HWS3 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
RFX6Q8HWS3 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RFX6Q8HWS3 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RFX6Q8HWS3 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
RFX6Q8HWS3 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RFX6Q8HWS3 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
RFX6Q8HWS3 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RFX6Q8HWS3 MFF-204ENST00000353339 2186 ntTSL 5 BASIC16.15■□□□□ 0.18
RFX6Q8HWS3 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RFX6Q8HWS3 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RFX6Q8HWS3 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
RFX6Q8HWS3 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.15■□□□□ 0.18
RFX6Q8HWS3 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
RFX6Q8HWS3 AC015922.1-201ENST00000421102 1152 ntBASIC16.15■□□□□ 0.18
RFX6Q8HWS3 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC16.15■□□□□ 0.18
RFX6Q8HWS3 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC16.15■□□□□ 0.18
RFX6Q8HWS3 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.15■□□□□ 0.18
RFX6Q8HWS3 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.15■□□□□ 0.18
RFX6Q8HWS3 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.15■□□□□ 0.18
RFX6Q8HWS3 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RFX6Q8HWS3 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.15■□□□□ 0.18
RFX6Q8HWS3 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
RFX6Q8HWS3 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.15■□□□□ 0.18
RFX6Q8HWS3 AP001160.2-201ENST00000596071 487 ntBASIC16.15■□□□□ 0.18
RFX6Q8HWS3 LINC00528-201ENST00000600723 2160 ntBASIC16.15■□□□□ 0.18
RFX6Q8HWS3 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.15■□□□□ 0.18
RFX6Q8HWS3 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
RFX6Q8HWS3 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC16.15■□□□□ 0.18
RFX6Q8HWS3 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RFX6Q8HWS3 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC16.15■□□□□ 0.18
RFX6Q8HWS3 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
RFX6Q8HWS3 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RFX6Q8HWS3 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RFX6Q8HWS3 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RFX6Q8HWS3 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
RFX6Q8HWS3 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
RFX6Q8HWS3 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RFX6Q8HWS3 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.18
RFX6Q8HWS3 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.14■□□□□ 0.18
RFX6Q8HWS3 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC16.14■□□□□ 0.17
RFX6Q8HWS3 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RFX6Q8HWS3 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC16.14■□□□□ 0.17
RFX6Q8HWS3 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RFX6Q8HWS3 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RFX6Q8HWS3 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RFX6Q8HWS3 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RFX6Q8HWS3 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RFX6Q8HWS3 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RFX6Q8HWS3 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RFX6Q8HWS3 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RFX6Q8HWS3 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RFX6Q8HWS3 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
RFX6Q8HWS3 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC16.14■□□□□ 0.17
RFX6Q8HWS3 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
RFX6Q8HWS3 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC16.14■□□□□ 0.17
RFX6Q8HWS3 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.14■□□□□ 0.17
RFX6Q8HWS3 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.14■□□□□ 0.17
RFX6Q8HWS3 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
RFX6Q8HWS3 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.14■□□□□ 0.17
RFX6Q8HWS3 AC140878.1-201ENST00000565277 250 ntBASIC16.14■□□□□ 0.17
RFX6Q8HWS3 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC16.14■□□□□ 0.17
RFX6Q8HWS3 AC074044.1-201ENST00000609673 707 ntBASIC16.14■□□□□ 0.17
RFX6Q8HWS3 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
RFX6Q8HWS3 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RFX6Q8HWS3 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
RFX6Q8HWS3 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
RFX6Q8HWS3 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
RFX6Q8HWS3 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
RFX6Q8HWS3 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC16.14■□□□□ 0.17
RFX6Q8HWS3 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC16.14■□□□□ 0.17
RFX6Q8HWS3 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RFX6Q8HWS3 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RFX6Q8HWS3 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC16.14■□□□□ 0.17
RFX6Q8HWS3 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC16.14■□□□□ 0.17
RFX6Q8HWS3 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RFX6Q8HWS3 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC16.14■□□□□ 0.17
RFX6Q8HWS3 TK1-203ENST00000588734 1681 ntTSL 2 BASIC16.14■□□□□ 0.17
RFX6Q8HWS3 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC16.14■□□□□ 0.17
RFX6Q8HWS3 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
RFX6Q8HWS3 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.14■□□□□ 0.17
RFX6Q8HWS3 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
RFX6Q8HWS3 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RFX6Q8HWS3 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC16.14■□□□□ 0.17
RFX6Q8HWS3 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RFX6Q8HWS3 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
RFX6Q8HWS3 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC16.13■□□□□ 0.17
RFX6Q8HWS3 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.13■□□□□ 0.17
RFX6Q8HWS3 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
RFX6Q8HWS3 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
RFX6Q8HWS3 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RFX6Q8HWS3 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RFX6Q8HWS3 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RFX6Q8HWS3 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms