Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC17.22■□□□□ 0.35
TRIM50Q86XT4 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM50Q86XT4 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC17.22■□□□□ 0.35
TRIM50Q86XT4 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
TRIM50Q86XT4 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC17.22■□□□□ 0.35
TRIM50Q86XT4 TUBB1P2-201ENST00000422712 1306 ntBASIC17.21■□□□□ 0.35
TRIM50Q86XT4 TUBB1P1-201ENST00000503144 1300 ntBASIC17.21■□□□□ 0.35
TRIM50Q86XT4 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM50Q86XT4 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC17.21■□□□□ 0.35
TRIM50Q86XT4 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM50Q86XT4 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM50Q86XT4 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM50Q86XT4 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM50Q86XT4 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM50Q86XT4 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM50Q86XT4 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM50Q86XT4 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM50Q86XT4 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM50Q86XT4 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM50Q86XT4 TPO-206ENST00000382269 1155 ntTSL 5 BASIC17.21■□□□□ 0.35
TRIM50Q86XT4 YBX1P6-201ENST00000442962 1002 ntBASIC17.21■□□□□ 0.35
TRIM50Q86XT4 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC17.21■□□□□ 0.35
TRIM50Q86XT4 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC17.21■□□□□ 0.35
TRIM50Q86XT4 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC17.21■□□□□ 0.35
TRIM50Q86XT4 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM50Q86XT4 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC17.21■□□□□ 0.35
TRIM50Q86XT4 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC17.21■□□□□ 0.35
TRIM50Q86XT4 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC17.21■□□□□ 0.35
TRIM50Q86XT4 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC17.21■□□□□ 0.35
TRIM50Q86XT4 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM50Q86XT4 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
TRIM50Q86XT4 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM50Q86XT4 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM50Q86XT4 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM50Q86XT4 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
TRIM50Q86XT4 LOX-206ENST00000639739 1626 ntTSL 5 BASIC17.21■□□□□ 0.35
TRIM50Q86XT4 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM50Q86XT4 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
TRIM50Q86XT4 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
TRIM50Q86XT4 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
TRIM50Q86XT4 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
TRIM50Q86XT4 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
TRIM50Q86XT4 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
TRIM50Q86XT4 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM50Q86XT4 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM50Q86XT4 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM50Q86XT4 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM50Q86XT4 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM50Q86XT4 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.2■□□□□ 0.34
TRIM50Q86XT4 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM50Q86XT4 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM50Q86XT4 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM50Q86XT4 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC17.2■□□□□ 0.34
TRIM50Q86XT4 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
TRIM50Q86XT4 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC17.2■□□□□ 0.34
TRIM50Q86XT4 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC17.2■□□□□ 0.34
TRIM50Q86XT4 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
TRIM50Q86XT4 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
TRIM50Q86XT4 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
TRIM50Q86XT4 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC17.2■□□□□ 0.34
TRIM50Q86XT4 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC17.2■□□□□ 0.34
TRIM50Q86XT4 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC17.2■□□□□ 0.34
TRIM50Q86XT4 AC010328.2-201ENST00000597698 1111 ntBASIC17.2■□□□□ 0.34
TRIM50Q86XT4 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC17.2■□□□□ 0.34
TRIM50Q86XT4 GPR182-203ENST00000622922 591 ntBASIC17.2■□□□□ 0.34
TRIM50Q86XT4 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC17.2■□□□□ 0.34
TRIM50Q86XT4 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.2■□□□□ 0.34
TRIM50Q86XT4 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM50Q86XT4 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM50Q86XT4 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC17.2■□□□□ 0.34
TRIM50Q86XT4 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM50Q86XT4 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM50Q86XT4 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM50Q86XT4 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM50Q86XT4 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC17.2■□□□□ 0.34
TRIM50Q86XT4 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM50Q86XT4 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM50Q86XT4 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC17.19■□□□□ 0.34
TRIM50Q86XT4 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM50Q86XT4 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM50Q86XT4 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
TRIM50Q86XT4 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM50Q86XT4 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM50Q86XT4 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM50Q86XT4 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM50Q86XT4 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC17.19■□□□□ 0.34
TRIM50Q86XT4 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM50Q86XT4 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM50Q86XT4 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC17.19■□□□□ 0.34
TRIM50Q86XT4 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.19■□□□□ 0.34
TRIM50Q86XT4 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
TRIM50Q86XT4 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM50Q86XT4 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
TRIM50Q86XT4 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM50Q86XT4 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM50Q86XT4 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM50Q86XT4 GUK1-206ENST00000366723 845 ntTSL 5 BASIC17.19■□□□□ 0.34
TRIM50Q86XT4 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
TRIM50Q86XT4 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC17.19■□□□□ 0.34
TRIM50Q86XT4 BRWD1P1-201ENST00000401091 371 ntBASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms