Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.86□□□□□ -0.19
LRRC28Q86X40 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LRRC28Q86X40 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LRRC28Q86X40 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LRRC28Q86X40 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
LRRC28Q86X40 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
LRRC28Q86X40 PON3-203ENST00000427422 894 ntTSL 3 BASIC13.86□□□□□ -0.19
LRRC28Q86X40 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LRRC28Q86X40 AC069335.1-201ENST00000489972 472 ntBASIC13.86□□□□□ -0.19
LRRC28Q86X40 DAD1-205ENST00000543337 501 ntTSL 3 BASIC13.86□□□□□ -0.19
LRRC28Q86X40 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC13.86□□□□□ -0.19
LRRC28Q86X40 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC13.86□□□□□ -0.19
LRRC28Q86X40 AC027307.2-201ENST00000591252 911 ntBASIC13.86□□□□□ -0.19
LRRC28Q86X40 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC13.86□□□□□ -0.19
LRRC28Q86X40 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC13.86□□□□□ -0.19
LRRC28Q86X40 AC009093.7-201ENST00000623853 1223 ntBASIC13.86□□□□□ -0.19
LRRC28Q86X40 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC13.86□□□□□ -0.19
LRRC28Q86X40 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
LRRC28Q86X40 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
LRRC28Q86X40 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC13.86□□□□□ -0.19
LRRC28Q86X40 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.86□□□□□ -0.19
LRRC28Q86X40 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LRRC28Q86X40 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC13.86□□□□□ -0.19
LRRC28Q86X40 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
LRRC28Q86X40 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LRRC28Q86X40 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LRRC28Q86X40 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
LRRC28Q86X40 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LRRC28Q86X40 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC13.86□□□□□ -0.19
LRRC28Q86X40 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LRRC28Q86X40 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
LRRC28Q86X40 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.86□□□□□ -0.19
LRRC28Q86X40 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC13.86□□□□□ -0.19
LRRC28Q86X40 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC13.86□□□□□ -0.19
LRRC28Q86X40 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC13.86□□□□□ -0.19
LRRC28Q86X40 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.86□□□□□ -0.19
LRRC28Q86X40 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LRRC28Q86X40 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
LRRC28Q86X40 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC13.85□□□□□ -0.19
LRRC28Q86X40 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LRRC28Q86X40 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
LRRC28Q86X40 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LRRC28Q86X40 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LRRC28Q86X40 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LRRC28Q86X40 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
LRRC28Q86X40 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LRRC28Q86X40 UXT-AS1-201ENST00000590504 1525 ntBASIC13.85□□□□□ -0.19
LRRC28Q86X40 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
LRRC28Q86X40 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LRRC28Q86X40 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC13.85□□□□□ -0.19
LRRC28Q86X40 AC067750.1-201ENST00000608826 6545 ntBASIC13.85□□□□□ -0.19
LRRC28Q86X40 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LRRC28Q86X40 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC13.85□□□□□ -0.19
LRRC28Q86X40 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LRRC28Q86X40 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LRRC28Q86X40 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LRRC28Q86X40 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.85□□□□□ -0.19
LRRC28Q86X40 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LRRC28Q86X40 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LRRC28Q86X40 MIR346-201ENST00000362234 95 ntBASIC13.85□□□□□ -0.19
LRRC28Q86X40 AL139400.1-201ENST00000366220 510 ntBASIC13.85□□□□□ -0.19
LRRC28Q86X40 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC13.85□□□□□ -0.19
LRRC28Q86X40 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LRRC28Q86X40 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LRRC28Q86X40 CBR1-202ENST00000399191 838 ntTSL 3 BASIC13.85□□□□□ -0.19
LRRC28Q86X40 KRT18P32-201ENST00000424695 1287 ntBASIC13.85□□□□□ -0.19
LRRC28Q86X40 FAM8A3P-201ENST00000427218 844 ntBASIC13.85□□□□□ -0.19
LRRC28Q86X40 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC13.85□□□□□ -0.19
LRRC28Q86X40 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC13.85□□□□□ -0.19
LRRC28Q86X40 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LRRC28Q86X40 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC13.85□□□□□ -0.19
LRRC28Q86X40 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LRRC28Q86X40 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LRRC28Q86X40 AC004449.1-201ENST00000564240 433 ntBASIC13.85□□□□□ -0.19
LRRC28Q86X40 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LRRC28Q86X40 SSH2-211ENST00000590153 570 ntTSL 4 BASIC13.85□□□□□ -0.19
LRRC28Q86X40 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.85□□□□□ -0.19
LRRC28Q86X40 OS9-207ENST00000439210 1946 ntTSL 2 BASIC13.85□□□□□ -0.19
LRRC28Q86X40 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
LRRC28Q86X40 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
LRRC28Q86X40 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
LRRC28Q86X40 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LRRC28Q86X40 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
LRRC28Q86X40 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LRRC28Q86X40 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC13.85□□□□□ -0.19
LRRC28Q86X40 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LRRC28Q86X40 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LRRC28Q86X40 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LRRC28Q86X40 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
LRRC28Q86X40 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
LRRC28Q86X40 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LRRC28Q86X40 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC13.85□□□□□ -0.19
LRRC28Q86X40 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
LRRC28Q86X40 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
LRRC28Q86X40 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LRRC28Q86X40 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LRRC28Q86X40 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LRRC28Q86X40 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LRRC28Q86X40 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LRRC28Q86X40 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms