Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 TMEM261P1-201ENST00000604899 340 ntBASIC16.17■□□□□ 0.18
RFWD3Q6PCD5 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC16.17■□□□□ 0.18
RFWD3Q6PCD5 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
RFWD3Q6PCD5 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RFWD3Q6PCD5 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC16.17■□□□□ 0.18
RFWD3Q6PCD5 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.17■□□□□ 0.18
RFWD3Q6PCD5 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RFWD3Q6PCD5 CU639417.3-201ENST00000624240 1404 ntBASIC16.17■□□□□ 0.18
RFWD3Q6PCD5 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC16.17■□□□□ 0.18
RFWD3Q6PCD5 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RFWD3Q6PCD5 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RFWD3Q6PCD5 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RFWD3Q6PCD5 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RFWD3Q6PCD5 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RFWD3Q6PCD5 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RFWD3Q6PCD5 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
RFWD3Q6PCD5 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RFWD3Q6PCD5 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC16.17■□□□□ 0.18
RFWD3Q6PCD5 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RFWD3Q6PCD5 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RFWD3Q6PCD5 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RFWD3Q6PCD5 AC026748.1-201ENST00000624349 3251 ntBASIC16.16■□□□□ 0.18
RFWD3Q6PCD5 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RFWD3Q6PCD5 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RFWD3Q6PCD5 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RFWD3Q6PCD5 AC106881.1-201ENST00000605849 3329 ntBASIC16.16■□□□□ 0.18
RFWD3Q6PCD5 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.16■□□□□ 0.18
RFWD3Q6PCD5 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC16.16■□□□□ 0.18
RFWD3Q6PCD5 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RFWD3Q6PCD5 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
RFWD3Q6PCD5 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
RFWD3Q6PCD5 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RFWD3Q6PCD5 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
RFWD3Q6PCD5 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RFWD3Q6PCD5 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC16.16■□□□□ 0.18
RFWD3Q6PCD5 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC16.16■□□□□ 0.18
RFWD3Q6PCD5 KRT18P43-201ENST00000469825 1281 ntBASIC16.16■□□□□ 0.18
RFWD3Q6PCD5 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC16.16■□□□□ 0.18
RFWD3Q6PCD5 AC132938.2-201ENST00000579188 680 ntBASIC16.16■□□□□ 0.18
RFWD3Q6PCD5 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
RFWD3Q6PCD5 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.16■□□□□ 0.18
RFWD3Q6PCD5 IGHV3-72-202ENST00000621503 303 ntBASIC16.16■□□□□ 0.18
RFWD3Q6PCD5 AL591163.1-201ENST00000641757 987 ntBASIC16.16■□□□□ 0.18
RFWD3Q6PCD5 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RFWD3Q6PCD5 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RFWD3Q6PCD5 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
RFWD3Q6PCD5 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
RFWD3Q6PCD5 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.16■□□□□ 0.18
RFWD3Q6PCD5 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.16■□□□□ 0.18
RFWD3Q6PCD5 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.16■□□□□ 0.18
RFWD3Q6PCD5 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
RFWD3Q6PCD5 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.16■□□□□ 0.18
RFWD3Q6PCD5 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC16.16■□□□□ 0.18
RFWD3Q6PCD5 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RFWD3Q6PCD5 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RFWD3Q6PCD5 CICP4-201ENST00000447359 2812 ntBASIC16.16■□□□□ 0.18
RFWD3Q6PCD5 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.16■□□□□ 0.18
RFWD3Q6PCD5 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
RFWD3Q6PCD5 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RFWD3Q6PCD5 GOLGA8DP-202ENST00000341390 2184 ntBASIC16.16■□□□□ 0.18
RFWD3Q6PCD5 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RFWD3Q6PCD5 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RFWD3Q6PCD5 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RFWD3Q6PCD5 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
RFWD3Q6PCD5 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RFWD3Q6PCD5 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
RFWD3Q6PCD5 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RFWD3Q6PCD5 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC16.15■□□□□ 0.18
RFWD3Q6PCD5 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RFWD3Q6PCD5 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RFWD3Q6PCD5 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
RFWD3Q6PCD5 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.15■□□□□ 0.18
RFWD3Q6PCD5 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RFWD3Q6PCD5 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC16.15■□□□□ 0.18
RFWD3Q6PCD5 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RFWD3Q6PCD5 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.15■□□□□ 0.18
RFWD3Q6PCD5 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RFWD3Q6PCD5 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RFWD3Q6PCD5 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
RFWD3Q6PCD5 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RFWD3Q6PCD5 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC16.15■□□□□ 0.18
RFWD3Q6PCD5 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC16.15■□□□□ 0.18
RFWD3Q6PCD5 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC16.15■□□□□ 0.18
RFWD3Q6PCD5 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC16.15■□□□□ 0.18
RFWD3Q6PCD5 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC16.15■□□□□ 0.18
RFWD3Q6PCD5 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC16.15■□□□□ 0.18
RFWD3Q6PCD5 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC16.15■□□□□ 0.18
RFWD3Q6PCD5 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC16.15■□□□□ 0.18
RFWD3Q6PCD5 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC16.15■□□□□ 0.18
RFWD3Q6PCD5 CR383656.12-201ENST00000549567 513 ntBASIC16.15■□□□□ 0.18
RFWD3Q6PCD5 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC16.15■□□□□ 0.18
RFWD3Q6PCD5 GPX4-206ENST00000588919 803 ntTSL 2 BASIC16.15■□□□□ 0.18
RFWD3Q6PCD5 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC16.15■□□□□ 0.18
RFWD3Q6PCD5 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
RFWD3Q6PCD5 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RFWD3Q6PCD5 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
RFWD3Q6PCD5 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RFWD3Q6PCD5 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
RFWD3Q6PCD5 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
RFWD3Q6PCD5 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms