Protein–RNA interactions for Protein: Q4ZHG4

FNDC1, Fibronectin type III domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 1,894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1Q4ZHG4 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FNDC1Q4ZHG4 AC079328.2-201ENST00000561241 3354 ntBASIC16.19■□□□□ 0.18
FNDC1Q4ZHG4 AL359258.3-201ENST00000622910 2331 ntBASIC16.19■□□□□ 0.18
FNDC1Q4ZHG4 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FNDC1Q4ZHG4 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FNDC1Q4ZHG4 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
FNDC1Q4ZHG4 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC16.19■□□□□ 0.18
FNDC1Q4ZHG4 RN7SL720P-201ENST00000488178 304 ntBASIC16.19■□□□□ 0.18
FNDC1Q4ZHG4 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
FNDC1Q4ZHG4 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC16.19■□□□□ 0.18
FNDC1Q4ZHG4 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FNDC1Q4ZHG4 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC16.19■□□□□ 0.18
FNDC1Q4ZHG4 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FNDC1Q4ZHG4 AC079336.7-201ENST00000623428 1078 ntBASIC16.19■□□□□ 0.18
FNDC1Q4ZHG4 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.19■□□□□ 0.18
FNDC1Q4ZHG4 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
FNDC1Q4ZHG4 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
FNDC1Q4ZHG4 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
FNDC1Q4ZHG4 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
FNDC1Q4ZHG4 AL138725.1-201ENST00000407347 1314 ntBASIC16.19■□□□□ 0.18
FNDC1Q4ZHG4 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
FNDC1Q4ZHG4 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
FNDC1Q4ZHG4 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
FNDC1Q4ZHG4 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC16.19■□□□□ 0.18
FNDC1Q4ZHG4 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
FNDC1Q4ZHG4 AC126177.1-201ENST00000547829 2218 ntBASIC16.19■□□□□ 0.18
FNDC1Q4ZHG4 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
FNDC1Q4ZHG4 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
FNDC1Q4ZHG4 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
FNDC1Q4ZHG4 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
FNDC1Q4ZHG4 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
FNDC1Q4ZHG4 AC091046.1-201ENST00000331871 207 ntBASIC16.18■□□□□ 0.18
FNDC1Q4ZHG4 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
FNDC1Q4ZHG4 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
FNDC1Q4ZHG4 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC16.18■□□□□ 0.18
FNDC1Q4ZHG4 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
FNDC1Q4ZHG4 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC16.18■□□□□ 0.18
FNDC1Q4ZHG4 AC125604.1-201ENST00000496255 707 ntBASIC16.18■□□□□ 0.18
FNDC1Q4ZHG4 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC16.18■□□□□ 0.18
FNDC1Q4ZHG4 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC16.18■□□□□ 0.18
FNDC1Q4ZHG4 AC116345.2-201ENST00000512837 523 ntBASIC16.18■□□□□ 0.18
FNDC1Q4ZHG4 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC16.18■□□□□ 0.18
FNDC1Q4ZHG4 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC16.18■□□□□ 0.18
FNDC1Q4ZHG4 EID1-202ENST00000560490 584 ntTSL 3 BASIC16.18■□□□□ 0.18
FNDC1Q4ZHG4 AC103988.2-201ENST00000561804 725 ntBASIC16.18■□□□□ 0.18
FNDC1Q4ZHG4 MIR4706-201ENST00000582134 82 ntBASIC16.18■□□□□ 0.18
FNDC1Q4ZHG4 AP000346.4-201ENST00000614827 381 ntBASIC16.18■□□□□ 0.18
FNDC1Q4ZHG4 AC022532.1-201ENST00000624563 1728 ntBASIC16.18■□□□□ 0.18
FNDC1Q4ZHG4 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
FNDC1Q4ZHG4 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC16.18■□□□□ 0.18
FNDC1Q4ZHG4 AC013268.4-201ENST00000637413 2228 ntBASIC16.18■□□□□ 0.18
FNDC1Q4ZHG4 AC090616.6-203ENST00000579186 1945 ntBASIC16.18■□□□□ 0.18
FNDC1Q4ZHG4 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
FNDC1Q4ZHG4 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.18■□□□□ 0.18
FNDC1Q4ZHG4 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
FNDC1Q4ZHG4 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
FNDC1Q4ZHG4 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
FNDC1Q4ZHG4 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FNDC1Q4ZHG4 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
FNDC1Q4ZHG4 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
FNDC1Q4ZHG4 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
FNDC1Q4ZHG4 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
FNDC1Q4ZHG4 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FNDC1Q4ZHG4 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FNDC1Q4ZHG4 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
FNDC1Q4ZHG4 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FNDC1Q4ZHG4 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FNDC1Q4ZHG4 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FNDC1Q4ZHG4 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
FNDC1Q4ZHG4 MIR33B-201ENST00000385104 96 ntBASIC16.18■□□□□ 0.18
FNDC1Q4ZHG4 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC16.18■□□□□ 0.18
FNDC1Q4ZHG4 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC16.18■□□□□ 0.18
FNDC1Q4ZHG4 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC16.18■□□□□ 0.18
FNDC1Q4ZHG4 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC16.18■□□□□ 0.18
FNDC1Q4ZHG4 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC16.18■□□□□ 0.18
FNDC1Q4ZHG4 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC16.18■□□□□ 0.18
FNDC1Q4ZHG4 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC16.18■□□□□ 0.18
FNDC1Q4ZHG4 SYT17-208ENST00000568433 812 ntTSL 3 BASIC16.18■□□□□ 0.18
FNDC1Q4ZHG4 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC16.18■□□□□ 0.18
FNDC1Q4ZHG4 AC128714.1-201ENST00000637035 887 ntBASIC16.18■□□□□ 0.18
FNDC1Q4ZHG4 ZBTB45P1-201ENST00000452761 1456 ntBASIC16.18■□□□□ 0.18
FNDC1Q4ZHG4 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
FNDC1Q4ZHG4 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.18■□□□□ 0.18
FNDC1Q4ZHG4 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
FNDC1Q4ZHG4 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
FNDC1Q4ZHG4 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC16.17■□□□□ 0.18
FNDC1Q4ZHG4 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
FNDC1Q4ZHG4 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
FNDC1Q4ZHG4 AL139384.1-201ENST00000612143 3047 ntBASIC16.17■□□□□ 0.18
FNDC1Q4ZHG4 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC16.17■□□□□ 0.18
FNDC1Q4ZHG4 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC16.17■□□□□ 0.18
FNDC1Q4ZHG4 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.17■□□□□ 0.18
FNDC1Q4ZHG4 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
FNDC1Q4ZHG4 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC16.17■□□□□ 0.18
FNDC1Q4ZHG4 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
FNDC1Q4ZHG4 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
FNDC1Q4ZHG4 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
FNDC1Q4ZHG4 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.17■□□□□ 0.18
FNDC1Q4ZHG4 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
FNDC1Q4ZHG4 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms