Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 ARL16-202ENST00000570561 768 ntTSL 2 BASIC13.55□□□□□ -0.24
HIST1H3AP68431 GPALPP1-207ENST00000611650 899 ntBASIC13.55□□□□□ -0.24
HIST1H3AP68431 AC093512.1-201ENST00000617969 520 ntBASIC13.55□□□□□ -0.24
HIST1H3AP68431 AL390754.1-201ENST00000619088 582 ntBASIC13.55□□□□□ -0.24
HIST1H3AP68431 GPR39-203ENST00000622084 900 ntTSL 5 BASIC13.55□□□□□ -0.24
HIST1H3AP68431 AL158212.4-201ENST00000624062 1286 ntBASIC13.55□□□□□ -0.24
HIST1H3AP68431 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HIST1H3AP68431 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
HIST1H3AP68431 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HIST1H3AP68431 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC13.55□□□□□ -0.24
HIST1H3AP68431 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HIST1H3AP68431 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
HIST1H3AP68431 GPI-205ENST00000586425 1799 ntTSL 5 BASIC13.55□□□□□ -0.24
HIST1H3AP68431 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
HIST1H3AP68431 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HIST1H3AP68431 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.55□□□□□ -0.24
HIST1H3AP68431 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
HIST1H3AP68431 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HIST1H3AP68431 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HIST1H3AP68431 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC13.55□□□□□ -0.24
HIST1H3AP68431 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HIST1H3AP68431 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
HIST1H3AP68431 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC13.55□□□□□ -0.24
HIST1H3AP68431 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HIST1H3AP68431 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HIST1H3AP68431 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HIST1H3AP68431 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
HIST1H3AP68431 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HIST1H3AP68431 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
HIST1H3AP68431 GSN-215ENST00000545652 2428 ntTSL 2 BASIC13.54□□□□□ -0.24
HIST1H3AP68431 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.54□□□□□ -0.24
HIST1H3AP68431 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HIST1H3AP68431 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.54□□□□□ -0.24
HIST1H3AP68431 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HIST1H3AP68431 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HIST1H3AP68431 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
HIST1H3AP68431 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HIST1H3AP68431 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
HIST1H3AP68431 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.54□□□□□ -0.24
HIST1H3AP68431 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC13.54□□□□□ -0.24
HIST1H3AP68431 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HIST1H3AP68431 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HIST1H3AP68431 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HIST1H3AP68431 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HIST1H3AP68431 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
HIST1H3AP68431 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
HIST1H3AP68431 MRPS18AP1-201ENST00000414458 589 ntBASIC13.54□□□□□ -0.24
HIST1H3AP68431 FAM8A3P-201ENST00000427218 844 ntBASIC13.54□□□□□ -0.24
HIST1H3AP68431 RASL12-203ENST00000434605 982 ntTSL 2 BASIC13.54□□□□□ -0.24
HIST1H3AP68431 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC13.54□□□□□ -0.24
HIST1H3AP68431 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
HIST1H3AP68431 FTH1-202ENST00000526640 786 ntTSL 2 BASIC13.54□□□□□ -0.24
HIST1H3AP68431 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC13.54□□□□□ -0.24
HIST1H3AP68431 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC13.54□□□□□ -0.24
HIST1H3AP68431 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC13.54□□□□□ -0.24
HIST1H3AP68431 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HIST1H3AP68431 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
HIST1H3AP68431 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HIST1H3AP68431 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HIST1H3AP68431 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
HIST1H3AP68431 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HIST1H3AP68431 ZEB1-AS1-208ENST00000607166 2503 ntBASIC13.54□□□□□ -0.24
HIST1H3AP68431 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
HIST1H3AP68431 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HIST1H3AP68431 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HIST1H3AP68431 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HIST1H3AP68431 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HIST1H3AP68431 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC13.54□□□□□ -0.24
HIST1H3AP68431 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HIST1H3AP68431 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC13.54□□□□□ -0.24
HIST1H3AP68431 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC13.54□□□□□ -0.24
HIST1H3AP68431 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC13.54□□□□□ -0.24
HIST1H3AP68431 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HIST1H3AP68431 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC13.53□□□□□ -0.24
HIST1H3AP68431 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HIST1H3AP68431 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HIST1H3AP68431 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HIST1H3AP68431 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
HIST1H3AP68431 CASK-202ENST00000378158 3848 ntTSL 5 BASIC13.53□□□□□ -0.24
HIST1H3AP68431 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.53□□□□□ -0.24
HIST1H3AP68431 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HIST1H3AP68431 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HIST1H3AP68431 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
HIST1H3AP68431 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
HIST1H3AP68431 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
HIST1H3AP68431 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HIST1H3AP68431 LINC01101-201ENST00000622953 1884 ntBASIC13.53□□□□□ -0.24
HIST1H3AP68431 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
HIST1H3AP68431 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
HIST1H3AP68431 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.53□□□□□ -0.24
HIST1H3AP68431 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC13.53□□□□□ -0.24
HIST1H3AP68431 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HIST1H3AP68431 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HIST1H3AP68431 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
HIST1H3AP68431 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HIST1H3AP68431 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HIST1H3AP68431 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
HIST1H3AP68431 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
HIST1H3AP68431 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC13.53□□□□□ -0.24
HIST1H3AP68431 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms