Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
UBA52P62987 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC13.48□□□□□ -0.25
UBA52P62987 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
UBA52P62987 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
UBA52P62987 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
UBA52P62987 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.48□□□□□ -0.25
UBA52P62987 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
UBA52P62987 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
UBA52P62987 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC13.48□□□□□ -0.25
UBA52P62987 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC13.48□□□□□ -0.25
UBA52P62987 AC109635.5-201ENST00000533593 962 ntBASIC13.48□□□□□ -0.25
UBA52P62987 PUDP-206ENST00000540122 825 ntTSL 2 BASIC13.48□□□□□ -0.25
UBA52P62987 AC005225.4-201ENST00000557330 545 ntBASIC13.48□□□□□ -0.25
UBA52P62987 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
UBA52P62987 LINC01225-203ENST00000563550 1244 ntBASIC13.48□□□□□ -0.25
UBA52P62987 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC13.48□□□□□ -0.25
UBA52P62987 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC13.48□□□□□ -0.25
UBA52P62987 AL158211.3-201ENST00000607385 239 ntBASIC13.48□□□□□ -0.25
UBA52P62987 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
UBA52P62987 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
UBA52P62987 MIR6080-201ENST00000617359 66 ntBASIC13.48□□□□□ -0.25
UBA52P62987 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
UBA52P62987 AC006277.1-201ENST00000624348 1610 ntBASIC13.48□□□□□ -0.25
UBA52P62987 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
UBA52P62987 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
UBA52P62987 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
UBA52P62987 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
UBA52P62987 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
UBA52P62987 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
UBA52P62987 AC079781.5-202ENST00000641784 3743 ntBASIC13.48□□□□□ -0.25
UBA52P62987 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
UBA52P62987 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
UBA52P62987 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
UBA52P62987 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC13.48□□□□□ -0.25
UBA52P62987 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
UBA52P62987 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
UBA52P62987 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
UBA52P62987 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
UBA52P62987 AC007686.3-201ENST00000619017 3487 ntBASIC13.48□□□□□ -0.25
UBA52P62987 GSN-215ENST00000545652 2428 ntTSL 2 BASIC13.48□□□□□ -0.25
UBA52P62987 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
UBA52P62987 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.47□□□□□ -0.25
UBA52P62987 COCH-203ENST00000460581 2688 ntTSL 2 BASIC13.47□□□□□ -0.25
UBA52P62987 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
UBA52P62987 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
UBA52P62987 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC13.47□□□□□ -0.25
UBA52P62987 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
UBA52P62987 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
UBA52P62987 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
UBA52P62987 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
UBA52P62987 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
UBA52P62987 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
UBA52P62987 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
UBA52P62987 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
UBA52P62987 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
UBA52P62987 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.47□□□□□ -0.25
UBA52P62987 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC13.47□□□□□ -0.25
UBA52P62987 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
UBA52P62987 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
UBA52P62987 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
UBA52P62987 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
UBA52P62987 MIR661-201ENST00000384842 89 ntBASIC13.47□□□□□ -0.25
UBA52P62987 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC13.47□□□□□ -0.25
UBA52P62987 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC13.47□□□□□ -0.25
UBA52P62987 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC13.47□□□□□ -0.25
UBA52P62987 UGT1A2P-201ENST00000454886 866 ntBASIC13.47□□□□□ -0.25
UBA52P62987 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
UBA52P62987 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC13.47□□□□□ -0.25
UBA52P62987 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC13.47□□□□□ -0.25
UBA52P62987 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC13.47□□□□□ -0.25
UBA52P62987 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC13.47□□□□□ -0.25
UBA52P62987 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC13.47□□□□□ -0.25
UBA52P62987 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC13.47□□□□□ -0.25
UBA52P62987 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC13.47□□□□□ -0.25
UBA52P62987 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
UBA52P62987 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
UBA52P62987 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
UBA52P62987 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
UBA52P62987 OS9-204ENST00000389146 2091 ntTSL 2 BASIC13.47□□□□□ -0.25
UBA52P62987 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
UBA52P62987 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
UBA52P62987 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC13.47□□□□□ -0.25
UBA52P62987 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
UBA52P62987 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
UBA52P62987 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
UBA52P62987 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
UBA52P62987 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
UBA52P62987 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC13.47□□□□□ -0.25
UBA52P62987 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC13.47□□□□□ -0.25
UBA52P62987 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC13.47□□□□□ -0.25
UBA52P62987 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
UBA52P62987 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
UBA52P62987 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
UBA52P62987 LOX-206ENST00000639739 1626 ntTSL 5 BASIC13.46□□□□□ -0.25
UBA52P62987 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
UBA52P62987 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
UBA52P62987 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
UBA52P62987 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
UBA52P62987 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
UBA52P62987 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms