Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 AC024267.1-201ENST00000582320 895 ntBASIC11.01□□□□□ -0.65
RPL39P62891 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC11.01□□□□□ -0.65
RPL39P62891 AC010507.1-201ENST00000633895 436 ntBASIC11.01□□□□□ -0.65
RPL39P62891 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC11.01□□□□□ -0.65
RPL39P62891 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
RPL39P62891 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
RPL39P62891 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
RPL39P62891 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC11.01□□□□□ -0.65
RPL39P62891 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RPL39P62891 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RPL39P62891 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RPL39P62891 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
RPL39P62891 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RPL39P62891 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
RPL39P62891 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC11.01□□□□□ -0.65
RPL39P62891 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC11.01□□□□□ -0.65
RPL39P62891 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RPL39P62891 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
RPL39P62891 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
RPL39P62891 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC11.01□□□□□ -0.65
RPL39P62891 PCDHGB8P-201ENST00000502926 1973 ntBASIC11.01□□□□□ -0.65
RPL39P62891 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC11.01□□□□□ -0.65
RPL39P62891 AL136982.4-201ENST00000437689 1740 ntBASIC11.01□□□□□ -0.65
RPL39P62891 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RPL39P62891 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC11.01□□□□□ -0.65
RPL39P62891 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RPL39P62891 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC11.01□□□□□ -0.65
RPL39P62891 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC11□□□□□ -0.65
RPL39P62891 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC11□□□□□ -0.65
RPL39P62891 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC11□□□□□ -0.65
RPL39P62891 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC11□□□□□ -0.65
RPL39P62891 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC11□□□□□ -0.65
RPL39P62891 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
RPL39P62891 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
RPL39P62891 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC11□□□□□ -0.65
RPL39P62891 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
RPL39P62891 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
RPL39P62891 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC11□□□□□ -0.65
RPL39P62891 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC11□□□□□ -0.65
RPL39P62891 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
RPL39P62891 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
RPL39P62891 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC11□□□□□ -0.65
RPL39P62891 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC11□□□□□ -0.65
RPL39P62891 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC11□□□□□ -0.65
RPL39P62891 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
RPL39P62891 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC11□□□□□ -0.65
RPL39P62891 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC11□□□□□ -0.65
RPL39P62891 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
RPL39P62891 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC11□□□□□ -0.65
RPL39P62891 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC11□□□□□ -0.65
RPL39P62891 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
RPL39P62891 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
RPL39P62891 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC11□□□□□ -0.65
RPL39P62891 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC11□□□□□ -0.65
RPL39P62891 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC11□□□□□ -0.65
RPL39P62891 METTL26-205ENST00000397666 726 ntTSL 2 BASIC11□□□□□ -0.65
RPL39P62891 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC11□□□□□ -0.65
RPL39P62891 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC11□□□□□ -0.65
RPL39P62891 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
RPL39P62891 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
RPL39P62891 VN2R19P-201ENST00000442399 1052 ntBASIC11□□□□□ -0.65
RPL39P62891 SKP2-204ENST00000508514 821 ntTSL 3 BASIC11□□□□□ -0.65
RPL39P62891 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC11□□□□□ -0.65
RPL39P62891 CD63-210ENST00000550776 870 ntTSL 5 BASIC11□□□□□ -0.65
RPL39P62891 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC11□□□□□ -0.65
RPL39P62891 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC11□□□□□ -0.65
RPL39P62891 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC11□□□□□ -0.65
RPL39P62891 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC11□□□□□ -0.65
RPL39P62891 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
RPL39P62891 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC11□□□□□ -0.65
RPL39P62891 AC107918.4-201ENST00000641966 3141 ntBASIC11□□□□□ -0.65
RPL39P62891 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC11□□□□□ -0.65
RPL39P62891 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
RPL39P62891 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
RPL39P62891 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC11□□□□□ -0.65
RPL39P62891 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC11□□□□□ -0.65
RPL39P62891 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC11□□□□□ -0.65
RPL39P62891 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC11□□□□□ -0.65
RPL39P62891 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
RPL39P62891 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC11□□□□□ -0.65
RPL39P62891 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC11□□□□□ -0.65
RPL39P62891 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC11□□□□□ -0.65
RPL39P62891 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC11□□□□□ -0.65
RPL39P62891 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
RPL39P62891 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC11□□□□□ -0.65
RPL39P62891 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC11□□□□□ -0.65
RPL39P62891 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC11□□□□□ -0.65
RPL39P62891 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
RPL39P62891 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
RPL39P62891 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC11□□□□□ -0.65
RPL39P62891 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
RPL39P62891 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC11□□□□□ -0.65
RPL39P62891 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC11□□□□□ -0.65
RPL39P62891 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
RPL39P62891 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC11□□□□□ -0.65
RPL39P62891 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
RPL39P62891 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
RPL39P62891 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC10.99□□□□□ -0.65
RPL39P62891 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
RPL39P62891 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC10.99□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms