Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VBP1P61758 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.94□□□□□ -0.18
VBP1P61758 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VBP1P61758 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VBP1P61758 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VBP1P61758 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
VBP1P61758 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
VBP1P61758 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
VBP1P61758 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
VBP1P61758 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VBP1P61758 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VBP1P61758 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
VBP1P61758 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC13.94□□□□□ -0.18
VBP1P61758 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
VBP1P61758 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
VBP1P61758 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
VBP1P61758 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
VBP1P61758 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC13.94□□□□□ -0.18
VBP1P61758 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
VBP1P61758 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC13.94□□□□□ -0.18
VBP1P61758 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
VBP1P61758 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC13.94□□□□□ -0.18
VBP1P61758 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC13.94□□□□□ -0.18
VBP1P61758 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC13.94□□□□□ -0.18
VBP1P61758 TPSP2-201ENST00000561760 610 ntBASIC13.94□□□□□ -0.18
VBP1P61758 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC13.94□□□□□ -0.18
VBP1P61758 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC13.94□□□□□ -0.18
VBP1P61758 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
VBP1P61758 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC13.94□□□□□ -0.18
VBP1P61758 AC006504.4-201ENST00000592118 1568 ntBASIC13.94□□□□□ -0.18
VBP1P61758 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC13.94□□□□□ -0.18
VBP1P61758 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC13.94□□□□□ -0.18
VBP1P61758 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VBP1P61758 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
VBP1P61758 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
VBP1P61758 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VBP1P61758 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
VBP1P61758 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC13.94□□□□□ -0.18
VBP1P61758 CR383656.2-201ENST00000548656 2254 ntBASIC13.94□□□□□ -0.18
VBP1P61758 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
VBP1P61758 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
VBP1P61758 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
VBP1P61758 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC13.94□□□□□ -0.18
VBP1P61758 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC13.94□□□□□ -0.18
VBP1P61758 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.94□□□□□ -0.18
VBP1P61758 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VBP1P61758 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC13.94□□□□□ -0.18
VBP1P61758 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
VBP1P61758 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VBP1P61758 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VBP1P61758 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
VBP1P61758 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
VBP1P61758 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
VBP1P61758 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
VBP1P61758 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
VBP1P61758 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
VBP1P61758 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
VBP1P61758 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
VBP1P61758 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VBP1P61758 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
VBP1P61758 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
VBP1P61758 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
VBP1P61758 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.93□□□□□ -0.18
VBP1P61758 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VBP1P61758 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
VBP1P61758 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC13.93□□□□□ -0.18
VBP1P61758 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VBP1P61758 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC13.93□□□□□ -0.18
VBP1P61758 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
VBP1P61758 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
VBP1P61758 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC13.93□□□□□ -0.18
VBP1P61758 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
VBP1P61758 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC13.93□□□□□ -0.18
VBP1P61758 AC087499.1-201ENST00000418141 1075 ntBASIC13.93□□□□□ -0.18
VBP1P61758 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
VBP1P61758 DRAXINP1-201ENST00000437611 948 ntBASIC13.93□□□□□ -0.18
VBP1P61758 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
VBP1P61758 HS6ST1P1-201ENST00000481504 1234 ntBASIC13.93□□□□□ -0.18
VBP1P61758 BET1L-206ENST00000486280 665 ntTSL 3 BASIC13.93□□□□□ -0.18
VBP1P61758 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC13.93□□□□□ -0.18
VBP1P61758 CIB2-208ENST00000560618 804 ntTSL 2 BASIC13.93□□□□□ -0.18
VBP1P61758 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC13.93□□□□□ -0.18
VBP1P61758 AC074051.2-201ENST00000565115 352 ntBASIC13.93□□□□□ -0.18
VBP1P61758 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
VBP1P61758 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC13.93□□□□□ -0.18
VBP1P61758 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
VBP1P61758 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VBP1P61758 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC13.93□□□□□ -0.18
VBP1P61758 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
VBP1P61758 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VBP1P61758 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VBP1P61758 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
VBP1P61758 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC13.93□□□□□ -0.18
VBP1P61758 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
VBP1P61758 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC13.93□□□□□ -0.18
VBP1P61758 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
VBP1P61758 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VBP1P61758 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VBP1P61758 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
VBP1P61758 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms