Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SEC61A1P61619 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SEC61A1P61619 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SEC61A1P61619 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SEC61A1P61619 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC13.66□□□□□ -0.22
SEC61A1P61619 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
SEC61A1P61619 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SEC61A1P61619 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
SEC61A1P61619 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SEC61A1P61619 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
SEC61A1P61619 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
SEC61A1P61619 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SEC61A1P61619 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SEC61A1P61619 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC13.66□□□□□ -0.22
SEC61A1P61619 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC13.66□□□□□ -0.22
SEC61A1P61619 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC13.66□□□□□ -0.22
SEC61A1P61619 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SEC61A1P61619 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
SEC61A1P61619 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
SEC61A1P61619 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SEC61A1P61619 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SEC61A1P61619 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
SEC61A1P61619 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SEC61A1P61619 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC13.66□□□□□ -0.22
SEC61A1P61619 SYS1-203ENST00000414310 795 ntTSL 3 BASIC13.66□□□□□ -0.22
SEC61A1P61619 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SEC61A1P61619 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC13.66□□□□□ -0.22
SEC61A1P61619 PPP6R2P1-201ENST00000450880 1275 ntBASIC13.66□□□□□ -0.22
SEC61A1P61619 KLF2P3-201ENST00000451977 1087 ntBASIC13.66□□□□□ -0.22
SEC61A1P61619 MDH2-205ENST00000461263 648 ntTSL 2 BASIC13.66□□□□□ -0.22
SEC61A1P61619 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC13.66□□□□□ -0.22
SEC61A1P61619 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC13.66□□□□□ -0.22
SEC61A1P61619 AC051619.7-201ENST00000568314 623 ntBASIC13.66□□□□□ -0.22
SEC61A1P61619 AC015911.4-201ENST00000588022 1070 ntBASIC13.66□□□□□ -0.22
SEC61A1P61619 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC13.66□□□□□ -0.22
SEC61A1P61619 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC13.66□□□□□ -0.22
SEC61A1P61619 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SEC61A1P61619 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
SEC61A1P61619 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SEC61A1P61619 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC13.66□□□□□ -0.22
SEC61A1P61619 GSN-215ENST00000545652 2428 ntTSL 2 BASIC13.66□□□□□ -0.22
SEC61A1P61619 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC13.66□□□□□ -0.22
SEC61A1P61619 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SEC61A1P61619 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SEC61A1P61619 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC13.66□□□□□ -0.22
SEC61A1P61619 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SEC61A1P61619 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SEC61A1P61619 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC13.66□□□□□ -0.22
SEC61A1P61619 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC13.66□□□□□ -0.22
SEC61A1P61619 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
SEC61A1P61619 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
SEC61A1P61619 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
SEC61A1P61619 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SEC61A1P61619 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SEC61A1P61619 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SEC61A1P61619 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SEC61A1P61619 AP3S2-216ENST00000617003 1561 ntBASIC13.66□□□□□ -0.22
SEC61A1P61619 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC13.66□□□□□ -0.22
SEC61A1P61619 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SEC61A1P61619 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SEC61A1P61619 GPI-205ENST00000586425 1799 ntTSL 5 BASIC13.66□□□□□ -0.22
SEC61A1P61619 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC13.66□□□□□ -0.22
SEC61A1P61619 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
SEC61A1P61619 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SEC61A1P61619 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SEC61A1P61619 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC13.65□□□□□ -0.22
SEC61A1P61619 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
SEC61A1P61619 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC13.65□□□□□ -0.22
SEC61A1P61619 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SEC61A1P61619 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SEC61A1P61619 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SEC61A1P61619 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SEC61A1P61619 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
SEC61A1P61619 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.65□□□□□ -0.22
SEC61A1P61619 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC13.65□□□□□ -0.22
SEC61A1P61619 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SEC61A1P61619 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
SEC61A1P61619 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
SEC61A1P61619 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SEC61A1P61619 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC13.65□□□□□ -0.22
SEC61A1P61619 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SEC61A1P61619 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SEC61A1P61619 PP14571-201ENST00000404327 934 ntTSL 2 BASIC13.65□□□□□ -0.22
SEC61A1P61619 SPDYE7P-202ENST00000420373 878 ntBASIC13.65□□□□□ -0.22
SEC61A1P61619 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
SEC61A1P61619 WDR53-203ENST00000429115 683 ntTSL 2 BASIC13.65□□□□□ -0.22
SEC61A1P61619 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC13.65□□□□□ -0.22
SEC61A1P61619 AC067863.1-201ENST00000494933 530 ntBASIC13.65□□□□□ -0.22
SEC61A1P61619 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC13.65□□□□□ -0.22
SEC61A1P61619 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC13.65□□□□□ -0.22
SEC61A1P61619 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC13.65□□□□□ -0.22
SEC61A1P61619 RARRES2P9-201ENST00000565168 469 ntBASIC13.65□□□□□ -0.22
SEC61A1P61619 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC13.65□□□□□ -0.22
SEC61A1P61619 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC13.65□□□□□ -0.22
SEC61A1P61619 MIR4453-201ENST00000584019 89 ntBASIC13.65□□□□□ -0.22
SEC61A1P61619 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
SEC61A1P61619 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC13.65□□□□□ -0.22
SEC61A1P61619 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SEC61A1P61619 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC13.65□□□□□ -0.22
SEC61A1P61619 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms