Protein–RNA interactions for Protein: P61088

UBE2N, Ubiquitin-conjugating enzyme E2 N, humanhuman

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2NP61088 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC13.66□□□□□ -0.22
UBE2NP61088 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC13.66□□□□□ -0.22
UBE2NP61088 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC13.66□□□□□ -0.22
UBE2NP61088 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
UBE2NP61088 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC13.66□□□□□ -0.22
UBE2NP61088 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC13.66□□□□□ -0.22
UBE2NP61088 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC13.66□□□□□ -0.22
UBE2NP61088 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC13.66□□□□□ -0.22
UBE2NP61088 SPDYE22P-201ENST00000582158 798 ntBASIC13.66□□□□□ -0.22
UBE2NP61088 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC13.66□□□□□ -0.22
UBE2NP61088 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC13.66□□□□□ -0.22
UBE2NP61088 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC13.66□□□□□ -0.22
UBE2NP61088 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC13.66□□□□□ -0.22
UBE2NP61088 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
UBE2NP61088 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UBE2NP61088 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
UBE2NP61088 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC13.66□□□□□ -0.22
UBE2NP61088 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
UBE2NP61088 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
UBE2NP61088 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC13.66□□□□□ -0.22
UBE2NP61088 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
UBE2NP61088 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
UBE2NP61088 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
UBE2NP61088 MYB-242ENST00000618728 3545 ntTSL 5 BASIC13.65□□□□□ -0.22
UBE2NP61088 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
UBE2NP61088 FUK-207ENST00000571514 3054 ntTSL 2 BASIC13.65□□□□□ -0.22
UBE2NP61088 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC13.65□□□□□ -0.22
UBE2NP61088 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
UBE2NP61088 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC13.65□□□□□ -0.22
UBE2NP61088 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
UBE2NP61088 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
UBE2NP61088 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
UBE2NP61088 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
UBE2NP61088 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
UBE2NP61088 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC13.65□□□□□ -0.22
UBE2NP61088 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC13.65□□□□□ -0.22
UBE2NP61088 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
UBE2NP61088 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC13.65□□□□□ -0.22
UBE2NP61088 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
UBE2NP61088 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC13.65□□□□□ -0.22
UBE2NP61088 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC13.65□□□□□ -0.22
UBE2NP61088 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC13.65□□□□□ -0.22
UBE2NP61088 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC13.65□□□□□ -0.22
UBE2NP61088 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC13.65□□□□□ -0.22
UBE2NP61088 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC13.65□□□□□ -0.22
UBE2NP61088 CHCHD2P3-201ENST00000603038 451 ntBASIC13.65□□□□□ -0.22
UBE2NP61088 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
UBE2NP61088 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC13.65□□□□□ -0.22
UBE2NP61088 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
UBE2NP61088 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
UBE2NP61088 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
UBE2NP61088 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
UBE2NP61088 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
UBE2NP61088 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
UBE2NP61088 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC13.65□□□□□ -0.22
UBE2NP61088 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
UBE2NP61088 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC13.65□□□□□ -0.22
UBE2NP61088 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
UBE2NP61088 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
UBE2NP61088 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC13.65□□□□□ -0.22
UBE2NP61088 AC067750.1-201ENST00000608826 6545 ntBASIC13.64□□□□□ -0.23
UBE2NP61088 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
UBE2NP61088 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
UBE2NP61088 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC13.64□□□□□ -0.23
UBE2NP61088 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC13.64□□□□□ -0.23
UBE2NP61088 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
UBE2NP61088 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
UBE2NP61088 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
UBE2NP61088 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC13.64□□□□□ -0.23
UBE2NP61088 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
UBE2NP61088 PAUPAR-201ENST00000630360 2965 ntBASIC13.64□□□□□ -0.23
UBE2NP61088 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
UBE2NP61088 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
UBE2NP61088 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
UBE2NP61088 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
UBE2NP61088 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC13.64□□□□□ -0.23
UBE2NP61088 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
UBE2NP61088 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC13.64□□□□□ -0.23
UBE2NP61088 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC13.64□□□□□ -0.23
UBE2NP61088 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
UBE2NP61088 AC098614.1-201ENST00000368528 745 ntBASIC13.64□□□□□ -0.23
UBE2NP61088 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
UBE2NP61088 AP006294.1-201ENST00000415407 339 ntBASIC13.64□□□□□ -0.23
UBE2NP61088 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC13.64□□□□□ -0.23
UBE2NP61088 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC13.64□□□□□ -0.23
UBE2NP61088 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
UBE2NP61088 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC13.64□□□□□ -0.23
UBE2NP61088 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
UBE2NP61088 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC13.64□□□□□ -0.23
UBE2NP61088 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC13.64□□□□□ -0.23
UBE2NP61088 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC13.64□□□□□ -0.23
UBE2NP61088 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC13.64□□□□□ -0.23
UBE2NP61088 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC13.64□□□□□ -0.23
UBE2NP61088 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
UBE2NP61088 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
UBE2NP61088 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
UBE2NP61088 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
UBE2NP61088 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC13.64□□□□□ -0.23
UBE2NP61088 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
UBE2NP61088 SBF1P1-201ENST00000444527 5631 ntBASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms