Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
RAB5BP61020 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC12.13□□□□□ -0.47
RAB5BP61020 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
RAB5BP61020 FES-203ENST00000394302 2133 ntTSL 5 BASIC12.13□□□□□ -0.47
RAB5BP61020 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RAB5BP61020 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RAB5BP61020 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RAB5BP61020 SERF2-207ENST00000409614 582 ntTSL 2 BASIC12.13□□□□□ -0.47
RAB5BP61020 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
RAB5BP61020 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC12.13□□□□□ -0.47
RAB5BP61020 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC12.13□□□□□ -0.47
RAB5BP61020 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC12.13□□□□□ -0.47
RAB5BP61020 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC12.13□□□□□ -0.47
RAB5BP61020 AL353719.1-201ENST00000566847 864 ntBASIC12.13□□□□□ -0.47
RAB5BP61020 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC12.13□□□□□ -0.47
RAB5BP61020 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
RAB5BP61020 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC12.13□□□□□ -0.47
RAB5BP61020 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
RAB5BP61020 AC022497.1-201ENST00000624916 3691 ntBASIC12.13□□□□□ -0.47
RAB5BP61020 CHL1-201ENST00000256509 8023 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RAB5BP61020 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC12.13□□□□□ -0.47
RAB5BP61020 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
RAB5BP61020 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
RAB5BP61020 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
RAB5BP61020 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
RAB5BP61020 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC12.13□□□□□ -0.47
RAB5BP61020 CDHR5-202ENST00000358353 3635 ntAPPRIS P4 TSL 5 BASIC12.13□□□□□ -0.47
RAB5BP61020 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
RAB5BP61020 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RAB5BP61020 GFRA1-203ENST00000369236 9109 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
RAB5BP61020 ITGAX-201ENST00000268296 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
RAB5BP61020 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
RAB5BP61020 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
RAB5BP61020 AC102953.2-201ENST00000609755 3026 ntBASIC12.13□□□□□ -0.47
RAB5BP61020 GPR173-201ENST00000332582 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RAB5BP61020 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC12.13□□□□□ -0.47
RAB5BP61020 CACNA1G-218ENST00000507510 7014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
RAB5BP61020 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RAB5BP61020 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RAB5BP61020 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
RAB5BP61020 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
RAB5BP61020 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
RAB5BP61020 LINC01544-201ENST00000567801 5168 ntTSL 2 BASIC12.12□□□□□ -0.47
RAB5BP61020 PCDHGA12-201ENST00000252085 4747 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
RAB5BP61020 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RAB5BP61020 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RAB5BP61020 MPZL2-201ENST00000278937 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RAB5BP61020 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
RAB5BP61020 EIF4G1-205ENST00000382330 5129 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
RAB5BP61020 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC12.12□□□□□ -0.47
RAB5BP61020 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC12.12□□□□□ -0.47
RAB5BP61020 ACADM-201ENST00000370834 2172 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
RAB5BP61020 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
RAB5BP61020 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC12.12□□□□□ -0.47
RAB5BP61020 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC12.12□□□□□ -0.47
RAB5BP61020 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RAB5BP61020 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
RAB5BP61020 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
RAB5BP61020 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
RAB5BP61020 FOXK1-201ENST00000328914 11181 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
RAB5BP61020 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
RAB5BP61020 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RAB5BP61020 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
RAB5BP61020 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC12.12□□□□□ -0.47
RAB5BP61020 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC12.12□□□□□ -0.47
RAB5BP61020 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC12.12□□□□□ -0.47
RAB5BP61020 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC12.12□□□□□ -0.47
RAB5BP61020 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC12.12□□□□□ -0.47
RAB5BP61020 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
RAB5BP61020 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC12.12□□□□□ -0.47
RAB5BP61020 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC12.12□□□□□ -0.47
RAB5BP61020 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RAB5BP61020 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC12.12□□□□□ -0.47
RAB5BP61020 GRAMD4P8-201ENST00000605465 1115 ntBASIC12.12□□□□□ -0.47
RAB5BP61020 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC12.12□□□□□ -0.47
RAB5BP61020 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
RAB5BP61020 WASH3P-207ENST00000560956 1394 ntBASIC12.12□□□□□ -0.47
RAB5BP61020 FO538757.1-201ENST00000623083 1397 ntBASIC12.12□□□□□ -0.47
RAB5BP61020 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC12.12□□□□□ -0.47
RAB5BP61020 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC12.12□□□□□ -0.47
RAB5BP61020 SLC8A3-205ENST00000394330 2622 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
RAB5BP61020 HPX-201ENST00000265983 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RAB5BP61020 NHSL1-204ENST00000427025 7500 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
RAB5BP61020 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
RAB5BP61020 GATAD2A-201ENST00000358713 5510 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
RAB5BP61020 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC12.12□□□□□ -0.47
RAB5BP61020 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RAB5BP61020 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
RAB5BP61020 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
RAB5BP61020 GRIPAP1-215ENST00000622599 2881 ntTSL 5 BASIC12.12□□□□□ -0.47
RAB5BP61020 ADRA2B-201ENST00000620793 3371 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
RAB5BP61020 ABCA3-202ENST00000382381 6446 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
RAB5BP61020 DCAF11-204ENST00000446197 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RAB5BP61020 HS3ST1-201ENST00000002596 8031 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RAB5BP61020 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
RAB5BP61020 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RAB5BP61020 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RAB5BP61020 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
RAB5BP61020 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC12.11□□□□□ -0.47
RAB5BP61020 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms