Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.54□□□□□ -0.24
CLDN12P56749 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CLDN12P56749 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CLDN12P56749 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CLDN12P56749 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CLDN12P56749 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CLDN12P56749 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CLDN12P56749 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
CLDN12P56749 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CLDN12P56749 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.54□□□□□ -0.24
CLDN12P56749 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC13.54□□□□□ -0.24
CLDN12P56749 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC13.54□□□□□ -0.24
CLDN12P56749 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CLDN12P56749 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.53□□□□□ -0.24
CLDN12P56749 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
CLDN12P56749 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CLDN12P56749 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC13.53□□□□□ -0.24
CLDN12P56749 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.53□□□□□ -0.24
CLDN12P56749 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
CLDN12P56749 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.53□□□□□ -0.24
CLDN12P56749 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
CLDN12P56749 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC13.53□□□□□ -0.24
CLDN12P56749 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
CLDN12P56749 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
CLDN12P56749 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC13.53□□□□□ -0.24
CLDN12P56749 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLDN12P56749 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.53□□□□□ -0.24
CLDN12P56749 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CLDN12P56749 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLDN12P56749 AC079781.3-201ENST00000449110 356 ntBASIC13.53□□□□□ -0.24
CLDN12P56749 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC13.53□□□□□ -0.24
CLDN12P56749 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CLDN12P56749 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLDN12P56749 AC105233.2-201ENST00000523697 349 ntBASIC13.53□□□□□ -0.24
CLDN12P56749 AF228730.5-201ENST00000530288 346 ntBASIC13.53□□□□□ -0.24
CLDN12P56749 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLDN12P56749 KRT19P2-202ENST00000557173 1012 ntBASIC13.53□□□□□ -0.24
CLDN12P56749 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC13.53□□□□□ -0.24
CLDN12P56749 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC13.53□□□□□ -0.24
CLDN12P56749 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLDN12P56749 C1R-201ENST00000535233 2211 ntTSL 2 BASIC13.53□□□□□ -0.24
CLDN12P56749 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CLDN12P56749 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLDN12P56749 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLDN12P56749 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLDN12P56749 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13.53□□□□□ -0.24
CLDN12P56749 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
CLDN12P56749 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CLDN12P56749 AL607033.1-201ENST00000623900 1599 ntBASIC13.53□□□□□ -0.24
CLDN12P56749 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLDN12P56749 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLDN12P56749 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
CLDN12P56749 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC13.53□□□□□ -0.24
CLDN12P56749 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC13.53□□□□□ -0.24
CLDN12P56749 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC13.53□□□□□ -0.24
CLDN12P56749 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLDN12P56749 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLDN12P56749 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLDN12P56749 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CLDN12P56749 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
CLDN12P56749 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
CLDN12P56749 AC010327.5-201ENST00000586923 3061 ntBASIC13.53□□□□□ -0.24
CLDN12P56749 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.53□□□□□ -0.24
CLDN12P56749 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
CLDN12P56749 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.52□□□□□ -0.24
CLDN12P56749 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC13.52□□□□□ -0.24
CLDN12P56749 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.24
CLDN12P56749 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CLDN12P56749 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.24
CLDN12P56749 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CLDN12P56749 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
CLDN12P56749 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
CLDN12P56749 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CLDN12P56749 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.52□□□□□ -0.24
CLDN12P56749 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CLDN12P56749 AC018529.2-202ENST00000611482 3087 ntBASIC13.52□□□□□ -0.24
CLDN12P56749 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC13.52□□□□□ -0.24
CLDN12P56749 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CLDN12P56749 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.24
CLDN12P56749 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CLDN12P56749 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CLDN12P56749 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CLDN12P56749 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC13.52□□□□□ -0.25
CLDN12P56749 AL031284.1-201ENST00000419297 478 ntBASIC13.52□□□□□ -0.25
CLDN12P56749 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC13.52□□□□□ -0.25
CLDN12P56749 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC13.52□□□□□ -0.25
CLDN12P56749 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC13.52□□□□□ -0.25
CLDN12P56749 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CLDN12P56749 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC13.52□□□□□ -0.25
CLDN12P56749 MAL2-202ENST00000531508 892 ntTSL 3 BASIC13.52□□□□□ -0.25
CLDN12P56749 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
CLDN12P56749 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC13.52□□□□□ -0.25
CLDN12P56749 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC13.52□□□□□ -0.25
CLDN12P56749 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CLDN12P56749 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
CLDN12P56749 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
CLDN12P56749 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC13.52□□□□□ -0.25
CLDN12P56749 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC13.52□□□□□ -0.25
CLDN12P56749 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC13.52□□□□□ -0.25
CLDN12P56749 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms