Protein–RNA interactions for Protein: P55084

HADHB, Trifunctional enzyme subunit beta, mitochondrial, humanhuman

Known RBP Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHBP55084 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.15■□□□□ 0.18
HADHBP55084 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HADHBP55084 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC16.15■□□□□ 0.18
HADHBP55084 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HADHBP55084 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
HADHBP55084 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
HADHBP55084 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
HADHBP55084 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC16.15■□□□□ 0.18
HADHBP55084 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HADHBP55084 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HADHBP55084 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HADHBP55084 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HADHBP55084 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
HADHBP55084 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC16.15■□□□□ 0.18
HADHBP55084 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HADHBP55084 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16.15■□□□□ 0.18
HADHBP55084 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HADHBP55084 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
HADHBP55084 AC114501.2-201ENST00000439631 535 ntBASIC16.15■□□□□ 0.18
HADHBP55084 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
HADHBP55084 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.15■□□□□ 0.18
HADHBP55084 AC069120.2-201ENST00000524091 540 ntBASIC16.15■□□□□ 0.18
HADHBP55084 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC16.15■□□□□ 0.18
HADHBP55084 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC16.15■□□□□ 0.18
HADHBP55084 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HADHBP55084 AC044860.1-202ENST00000559481 777 ntBASIC16.15■□□□□ 0.18
HADHBP55084 AC140878.1-201ENST00000565277 250 ntBASIC16.15■□□□□ 0.18
HADHBP55084 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.15■□□□□ 0.18
HADHBP55084 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC16.15■□□□□ 0.18
HADHBP55084 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC16.15■□□□□ 0.18
HADHBP55084 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.15■□□□□ 0.18
HADHBP55084 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HADHBP55084 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
HADHBP55084 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
HADHBP55084 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC16.15■□□□□ 0.18
HADHBP55084 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HADHBP55084 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.15■□□□□ 0.18
HADHBP55084 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC16.15■□□□□ 0.18
HADHBP55084 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
HADHBP55084 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC16.15■□□□□ 0.18
HADHBP55084 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HADHBP55084 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC16.15■□□□□ 0.18
HADHBP55084 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC16.15■□□□□ 0.18
HADHBP55084 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HADHBP55084 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
HADHBP55084 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
HADHBP55084 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
HADHBP55084 C1R-202ENST00000536053 2347 ntTSL 2 BASIC16.14■□□□□ 0.18
HADHBP55084 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
HADHBP55084 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HADHBP55084 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC16.14■□□□□ 0.17
HADHBP55084 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HADHBP55084 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
HADHBP55084 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC16.14■□□□□ 0.17
HADHBP55084 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HADHBP55084 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HADHBP55084 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
HADHBP55084 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HADHBP55084 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
HADHBP55084 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HADHBP55084 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HADHBP55084 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HADHBP55084 SUN1-204ENST00000403868 978 ntTSL 2 BASIC16.14■□□□□ 0.17
HADHBP55084 TSEN15P1-201ENST00000423257 515 ntBASIC16.14■□□□□ 0.17
HADHBP55084 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC16.14■□□□□ 0.17
HADHBP55084 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.14■□□□□ 0.17
HADHBP55084 AC004967.1-201ENST00000453589 447 ntBASIC16.14■□□□□ 0.17
HADHBP55084 AC004066.1-201ENST00000502488 802 ntBASIC16.14■□□□□ 0.17
HADHBP55084 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.14■□□□□ 0.17
HADHBP55084 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.14■□□□□ 0.17
HADHBP55084 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HADHBP55084 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
HADHBP55084 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HADHBP55084 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC16.14■□□□□ 0.17
HADHBP55084 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
HADHBP55084 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HADHBP55084 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HADHBP55084 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
HADHBP55084 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HADHBP55084 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16.14■□□□□ 0.17
HADHBP55084 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HADHBP55084 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
HADHBP55084 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HADHBP55084 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HADHBP55084 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HADHBP55084 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
HADHBP55084 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC16.13■□□□□ 0.17
HADHBP55084 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HADHBP55084 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
HADHBP55084 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.13■□□□□ 0.17
HADHBP55084 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HADHBP55084 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
HADHBP55084 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HADHBP55084 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
HADHBP55084 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HADHBP55084 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HADHBP55084 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HADHBP55084 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
HADHBP55084 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
HADHBP55084 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms