Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PMS1P54277 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
PMS1P54277 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PMS1P54277 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
PMS1P54277 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC17.03■□□□□ 0.32
PMS1P54277 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PMS1P54277 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC17.03■□□□□ 0.32
PMS1P54277 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
PMS1P54277 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PMS1P54277 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
PMS1P54277 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PMS1P54277 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PMS1P54277 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PMS1P54277 AC114501.2-201ENST00000439631 535 ntBASIC17.03■□□□□ 0.32
PMS1P54277 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
PMS1P54277 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC17.03■□□□□ 0.32
PMS1P54277 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
PMS1P54277 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PMS1P54277 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC17.03■□□□□ 0.32
PMS1P54277 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
PMS1P54277 SSH2-210ENST00000582084 560 ntTSL 3 BASIC17.03■□□□□ 0.32
PMS1P54277 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PMS1P54277 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PMS1P54277 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PMS1P54277 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
PMS1P54277 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PMS1P54277 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
PMS1P54277 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PMS1P54277 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
PMS1P54277 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PMS1P54277 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC17.03■□□□□ 0.32
PMS1P54277 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC17.03■□□□□ 0.32
PMS1P54277 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PMS1P54277 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC17.03■□□□□ 0.32
PMS1P54277 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PMS1P54277 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC17.03■□□□□ 0.32
PMS1P54277 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC17.03■□□□□ 0.32
PMS1P54277 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
PMS1P54277 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PMS1P54277 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC17.02■□□□□ 0.32
PMS1P54277 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PMS1P54277 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PMS1P54277 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PMS1P54277 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PMS1P54277 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PMS1P54277 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PMS1P54277 AC232323.1-201ENST00000540724 2099 ntBASIC17.02■□□□□ 0.32
PMS1P54277 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PMS1P54277 REXO1L5P-201ENST00000622260 2098 ntBASIC17.02■□□□□ 0.32
PMS1P54277 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PMS1P54277 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC17.02■□□□□ 0.32
PMS1P54277 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC17.02■□□□□ 0.32
PMS1P54277 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PMS1P54277 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PMS1P54277 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PMS1P54277 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC17.02■□□□□ 0.32
PMS1P54277 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PMS1P54277 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC17.02■□□□□ 0.32
PMS1P54277 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC17.02■□□□□ 0.32
PMS1P54277 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC17.02■□□□□ 0.32
PMS1P54277 AC067863.1-201ENST00000494933 530 ntBASIC17.02■□□□□ 0.32
PMS1P54277 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC17.02■□□□□ 0.32
PMS1P54277 AC092337.1-201ENST00000568699 1129 ntBASIC17.02■□□□□ 0.32
PMS1P54277 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC17.02■□□□□ 0.32
PMS1P54277 AC011467.4-201ENST00000594891 528 ntBASIC17.02■□□□□ 0.32
PMS1P54277 AL390955.2-201ENST00000603032 514 ntBASIC17.02■□□□□ 0.32
PMS1P54277 AC000095.1-201ENST00000603208 874 ntBASIC17.02■□□□□ 0.32
PMS1P54277 AL391069.4-201ENST00000609583 481 ntBASIC17.02■□□□□ 0.32
PMS1P54277 AC008738.7-201ENST00000609744 511 ntBASIC17.02■□□□□ 0.32
PMS1P54277 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC17.02■□□□□ 0.32
PMS1P54277 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
PMS1P54277 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PMS1P54277 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PMS1P54277 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PMS1P54277 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC17.02■□□□□ 0.32
PMS1P54277 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PMS1P54277 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PMS1P54277 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC17.02■□□□□ 0.32
PMS1P54277 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
PMS1P54277 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PMS1P54277 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC17.02■□□□□ 0.31
PMS1P54277 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC17.02■□□□□ 0.31
PMS1P54277 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PMS1P54277 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PMS1P54277 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
PMS1P54277 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC17.01■□□□□ 0.31
PMS1P54277 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC17.01■□□□□ 0.31
PMS1P54277 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC17.01■□□□□ 0.31
PMS1P54277 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
PMS1P54277 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PMS1P54277 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PMS1P54277 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
PMS1P54277 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PMS1P54277 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
PMS1P54277 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC17.01■□□□□ 0.31
PMS1P54277 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC17.01■□□□□ 0.31
PMS1P54277 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PMS1P54277 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
PMS1P54277 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
PMS1P54277 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms