Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
LIMK1P53667 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
LIMK1P53667 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LIMK1P53667 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.26■□□□□ 0.03
LIMK1P53667 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC15.26■□□□□ 0.03
LIMK1P53667 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LIMK1P53667 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.26■□□□□ 0.03
LIMK1P53667 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.26■□□□□ 0.03
LIMK1P53667 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.26■□□□□ 0.03
LIMK1P53667 LINC02228-204ENST00000642115 2962 ntBASIC15.26■□□□□ 0.03
LIMK1P53667 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LIMK1P53667 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
LIMK1P53667 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LIMK1P53667 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
LIMK1P53667 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC15.26■□□□□ 0.03
LIMK1P53667 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LIMK1P53667 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LIMK1P53667 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC15.26■□□□□ 0.03
LIMK1P53667 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC15.26■□□□□ 0.03
LIMK1P53667 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LIMK1P53667 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC15.26■□□□□ 0.03
LIMK1P53667 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC15.26■□□□□ 0.03
LIMK1P53667 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
LIMK1P53667 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LIMK1P53667 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC15.26■□□□□ 0.03
LIMK1P53667 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LIMK1P53667 AP001582.1-201ENST00000525856 295 ntBASIC15.26■□□□□ 0.03
LIMK1P53667 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC15.26■□□□□ 0.03
LIMK1P53667 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LIMK1P53667 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC15.26■□□□□ 0.03
LIMK1P53667 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC15.26■□□□□ 0.03
LIMK1P53667 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC15.26■□□□□ 0.03
LIMK1P53667 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
LIMK1P53667 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
LIMK1P53667 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.26■□□□□ 0.03
LIMK1P53667 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.26■□□□□ 0.03
LIMK1P53667 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LIMK1P53667 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC15.26■□□□□ 0.03
LIMK1P53667 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
LIMK1P53667 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LIMK1P53667 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.26■□□□□ 0.03
LIMK1P53667 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LIMK1P53667 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LIMK1P53667 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
LIMK1P53667 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LIMK1P53667 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
LIMK1P53667 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
LIMK1P53667 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.25■□□□□ 0.03
LIMK1P53667 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LIMK1P53667 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LIMK1P53667 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LIMK1P53667 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.25■□□□□ 0.03
LIMK1P53667 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LIMK1P53667 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LIMK1P53667 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LIMK1P53667 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
LIMK1P53667 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LIMK1P53667 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LIMK1P53667 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LIMK1P53667 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LIMK1P53667 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LIMK1P53667 SUN1-204ENST00000403868 978 ntTSL 2 BASIC15.25■□□□□ 0.03
LIMK1P53667 AL355334.1-201ENST00000417713 215 ntBASIC15.25■□□□□ 0.03
LIMK1P53667 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC15.25■□□□□ 0.03
LIMK1P53667 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC15.25■□□□□ 0.03
LIMK1P53667 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LIMK1P53667 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC15.25■□□□□ 0.03
LIMK1P53667 MIR4750-201ENST00000584564 56 ntBASIC15.25■□□□□ 0.03
LIMK1P53667 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC15.25■□□□□ 0.03
LIMK1P53667 AC079336.7-201ENST00000623428 1078 ntBASIC15.25■□□□□ 0.03
LIMK1P53667 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LIMK1P53667 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.25■□□□□ 0.03
LIMK1P53667 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.25■□□□□ 0.03
LIMK1P53667 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LIMK1P53667 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LIMK1P53667 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
LIMK1P53667 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
LIMK1P53667 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.25■□□□□ 0.03
LIMK1P53667 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC15.25■□□□□ 0.03
LIMK1P53667 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.25■□□□□ 0.03
LIMK1P53667 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.25■□□□□ 0.03
LIMK1P53667 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LIMK1P53667 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LIMK1P53667 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LIMK1P53667 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
LIMK1P53667 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
LIMK1P53667 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
LIMK1P53667 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LIMK1P53667 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.24■□□□□ 0.03
LIMK1P53667 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
LIMK1P53667 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
LIMK1P53667 AC079178.1-201ENST00000420915 656 ntBASIC15.24■□□□□ 0.03
LIMK1P53667 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC15.24■□□□□ 0.03
LIMK1P53667 CNN2P10-201ENST00000443067 918 ntBASIC15.24■□□□□ 0.03
LIMK1P53667 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC15.24■□□□□ 0.03
LIMK1P53667 SPTLC1P5-201ENST00000450718 252 ntBASIC15.24■□□□□ 0.03
LIMK1P53667 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC15.24■□□□□ 0.03
LIMK1P53667 AC134698.3-201ENST00000523880 214 ntBASIC15.24■□□□□ 0.03
LIMK1P53667 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC15.24■□□□□ 0.03
LIMK1P53667 AC026740.1-201ENST00000607068 791 ntBASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms