Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC12.31□□□□□ -0.44
CDC34P49427 LSM5-204ENST00000409909 740 ntTSL 2 BASIC12.31□□□□□ -0.44
CDC34P49427 AC211429.1-201ENST00000415277 523 ntBASIC12.31□□□□□ -0.44
CDC34P49427 ATP6V0CP3-201ENST00000417255 467 ntBASIC12.31□□□□□ -0.44
CDC34P49427 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CDC34P49427 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC12.31□□□□□ -0.44
CDC34P49427 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC12.31□□□□□ -0.44
CDC34P49427 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CDC34P49427 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC12.31□□□□□ -0.44
CDC34P49427 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC12.31□□□□□ -0.44
CDC34P49427 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CDC34P49427 PAM16-215ENST00000577031 548 ntTSL 4 BASIC12.31□□□□□ -0.44
CDC34P49427 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC12.31□□□□□ -0.44
CDC34P49427 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC12.31□□□□□ -0.44
CDC34P49427 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC12.31□□□□□ -0.44
CDC34P49427 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC12.31□□□□□ -0.44
CDC34P49427 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CDC34P49427 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC12.31□□□□□ -0.44
CDC34P49427 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CDC34P49427 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC12.31□□□□□ -0.44
CDC34P49427 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
CDC34P49427 AC131212.3-201ENST00000624087 4219 ntBASIC12.31□□□□□ -0.44
CDC34P49427 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC12.31□□□□□ -0.44
CDC34P49427 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
CDC34P49427 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CDC34P49427 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
CDC34P49427 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CDC34P49427 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CDC34P49427 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CDC34P49427 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CDC34P49427 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CDC34P49427 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CDC34P49427 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CDC34P49427 CICP20-201ENST00000443330 2801 ntBASIC12.31□□□□□ -0.44
CDC34P49427 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CDC34P49427 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CDC34P49427 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CDC34P49427 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CDC34P49427 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CDC34P49427 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CDC34P49427 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC12.31□□□□□ -0.44
CDC34P49427 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC12.31□□□□□ -0.44
CDC34P49427 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CDC34P49427 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
CDC34P49427 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CDC34P49427 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CDC34P49427 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CDC34P49427 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CDC34P49427 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
CDC34P49427 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC12.3□□□□□ -0.44
CDC34P49427 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CDC34P49427 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CDC34P49427 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC12.3□□□□□ -0.44
CDC34P49427 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
CDC34P49427 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
CDC34P49427 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CDC34P49427 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC12.3□□□□□ -0.44
CDC34P49427 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC12.3□□□□□ -0.44
CDC34P49427 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC12.3□□□□□ -0.44
CDC34P49427 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
CDC34P49427 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
CDC34P49427 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC12.3□□□□□ -0.44
CDC34P49427 MIR193BHG-211ENST00000641433 5365 ntBASIC12.3□□□□□ -0.44
CDC34P49427 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CDC34P49427 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CDC34P49427 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CDC34P49427 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC12.3□□□□□ -0.44
CDC34P49427 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CDC34P49427 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CDC34P49427 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
CDC34P49427 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CDC34P49427 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CDC34P49427 TMPOP1-202ENST00000424642 1267 ntBASIC12.3□□□□□ -0.44
CDC34P49427 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC12.3□□□□□ -0.44
CDC34P49427 PRYP6-201ENST00000514804 343 ntBASIC12.3□□□□□ -0.44
CDC34P49427 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC12.3□□□□□ -0.44
CDC34P49427 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC12.3□□□□□ -0.44
CDC34P49427 OR7E47P-204ENST00000575924 449 ntBASIC12.3□□□□□ -0.44
CDC34P49427 AL450472.2-201ENST00000603663 1156 ntBASIC12.3□□□□□ -0.44
CDC34P49427 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC12.3□□□□□ -0.44
CDC34P49427 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC12.3□□□□□ -0.44
CDC34P49427 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC12.3□□□□□ -0.44
CDC34P49427 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC12.3□□□□□ -0.44
CDC34P49427 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC12.3□□□□□ -0.44
CDC34P49427 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC12.3□□□□□ -0.44
CDC34P49427 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC12.3□□□□□ -0.44
CDC34P49427 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CDC34P49427 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
CDC34P49427 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC12.3□□□□□ -0.44
CDC34P49427 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CDC34P49427 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CDC34P49427 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC12.3□□□□□ -0.44
CDC34P49427 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CDC34P49427 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC12.3□□□□□ -0.44
CDC34P49427 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC12.3□□□□□ -0.44
CDC34P49427 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC12.3□□□□□ -0.44
CDC34P49427 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CDC34P49427 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
CDC34P49427 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CDC34P49427 AC107918.4-201ENST00000641966 3141 ntBASIC12.3□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms