Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.91□□□□□ -0.02
SLC6A12P48065 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.91□□□□□ -0.02
SLC6A12P48065 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.91□□□□□ -0.02
SLC6A12P48065 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC6A12P48065 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC6A12P48065 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC6A12P48065 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SLC6A12P48065 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SLC6A12P48065 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC6A12P48065 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
SLC6A12P48065 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.9□□□□□ -0.02
SLC6A12P48065 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC6A12P48065 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SLC6A12P48065 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC6A12P48065 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SLC6A12P48065 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SLC6A12P48065 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
SLC6A12P48065 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC6A12P48065 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC14.9□□□□□ -0.02
SLC6A12P48065 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC6A12P48065 MIR770-201ENST00000390219 98 ntBASIC14.9□□□□□ -0.02
SLC6A12P48065 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC6A12P48065 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.9□□□□□ -0.02
SLC6A12P48065 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.9□□□□□ -0.02
SLC6A12P48065 CD81-207ENST00000481687 890 ntTSL 2 BASIC14.9□□□□□ -0.02
SLC6A12P48065 AC004066.1-201ENST00000502488 802 ntBASIC14.9□□□□□ -0.02
SLC6A12P48065 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC14.9□□□□□ -0.02
SLC6A12P48065 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC14.9□□□□□ -0.02
SLC6A12P48065 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.9□□□□□ -0.02
SLC6A12P48065 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.9□□□□□ -0.02
SLC6A12P48065 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
SLC6A12P48065 BRI3BPP1-201ENST00000594224 787 ntBASIC14.9□□□□□ -0.02
SLC6A12P48065 AC107373.2-201ENST00000607735 490 ntBASIC14.9□□□□□ -0.02
SLC6A12P48065 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC14.9□□□□□ -0.02
SLC6A12P48065 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC14.9□□□□□ -0.02
SLC6A12P48065 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC14.9□□□□□ -0.02
SLC6A12P48065 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.9□□□□□ -0.02
SLC6A12P48065 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC6A12P48065 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
SLC6A12P48065 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC6A12P48065 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.9□□□□□ -0.02
SLC6A12P48065 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC6A12P48065 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.9□□□□□ -0.02
SLC6A12P48065 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC6A12P48065 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC6A12P48065 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC6A12P48065 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC6A12P48065 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.9□□□□□ -0.02
SLC6A12P48065 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC14.9□□□□□ -0.02
SLC6A12P48065 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC14.9□□□□□ -0.02
SLC6A12P48065 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC6A12P48065 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC6A12P48065 AC093525.8-201ENST00000624099 1342 ntBASIC14.9□□□□□ -0.02
SLC6A12P48065 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC6A12P48065 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC6A12P48065 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC6A12P48065 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC14.9□□□□□ -0.02
SLC6A12P48065 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
SLC6A12P48065 AC007787.1-201ENST00000588095 1583 ntBASIC14.9□□□□□ -0.02
SLC6A12P48065 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.89□□□□□ -0.03
SLC6A12P48065 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SLC6A12P48065 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SLC6A12P48065 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
SLC6A12P48065 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
SLC6A12P48065 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC6A12P48065 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.89□□□□□ -0.03
SLC6A12P48065 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC6A12P48065 SLC7A15P-201ENST00000424028 1363 ntBASIC14.89□□□□□ -0.03
SLC6A12P48065 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
SLC6A12P48065 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC6A12P48065 AC099063.4-201ENST00000641099 1602 ntBASIC14.89□□□□□ -0.03
SLC6A12P48065 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC6A12P48065 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC6A12P48065 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
SLC6A12P48065 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
SLC6A12P48065 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC6A12P48065 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC6A12P48065 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SLC6A12P48065 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC14.89□□□□□ -0.03
SLC6A12P48065 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
SLC6A12P48065 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC6A12P48065 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC6A12P48065 MPV17-208ENST00000405076 603 ntTSL 5 BASIC14.89□□□□□ -0.03
SLC6A12P48065 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.89□□□□□ -0.03
SLC6A12P48065 AL353779.1-201ENST00000434793 351 ntBASIC14.89□□□□□ -0.03
SLC6A12P48065 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
SLC6A12P48065 AC055876.2-201ENST00000531834 546 ntBASIC14.89□□□□□ -0.03
SLC6A12P48065 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC14.89□□□□□ -0.03
SLC6A12P48065 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
SLC6A12P48065 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC6A12P48065 INO80C-206ENST00000586489 594 ntTSL 3 BASIC14.89□□□□□ -0.03
SLC6A12P48065 INO80C-210ENST00000590757 595 ntTSL 2 BASIC14.89□□□□□ -0.03
SLC6A12P48065 AC009118.2-201ENST00000613275 655 ntBASIC14.89□□□□□ -0.03
SLC6A12P48065 AJ011932.1-201ENST00000621707 465 ntBASIC14.89□□□□□ -0.03
SLC6A12P48065 HFE2-206ENST00000634927 506 ntTSL 4 BASIC14.89□□□□□ -0.03
SLC6A12P48065 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SLC6A12P48065 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SLC6A12P48065 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SLC6A12P48065 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC6A12P48065 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms