Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC16.14■□□□□ 0.17
MMP13P45452 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.14■□□□□ 0.17
MMP13P45452 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
MMP13P45452 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
MMP13P45452 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
MMP13P45452 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.14■□□□□ 0.17
MMP13P45452 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
MMP13P45452 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
MMP13P45452 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC16.14■□□□□ 0.17
MMP13P45452 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
MMP13P45452 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
MMP13P45452 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.14■□□□□ 0.17
MMP13P45452 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC16.14■□□□□ 0.17
MMP13P45452 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC16.14■□□□□ 0.17
MMP13P45452 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
MMP13P45452 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
MMP13P45452 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC16.14■□□□□ 0.17
MMP13P45452 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
MMP13P45452 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
MMP13P45452 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC16.14■□□□□ 0.17
MMP13P45452 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
MMP13P45452 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
MMP13P45452 AL607033.1-201ENST00000623900 1599 ntBASIC16.13■□□□□ 0.17
MMP13P45452 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
MMP13P45452 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
MMP13P45452 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
MMP13P45452 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
MMP13P45452 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
MMP13P45452 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC16.13■□□□□ 0.17
MMP13P45452 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
MMP13P45452 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.13■□□□□ 0.17
MMP13P45452 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
MMP13P45452 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
MMP13P45452 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
MMP13P45452 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
MMP13P45452 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
MMP13P45452 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.13■□□□□ 0.17
MMP13P45452 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16.13■□□□□ 0.17
MMP13P45452 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.13■□□□□ 0.17
MMP13P45452 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
MMP13P45452 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.13■□□□□ 0.17
MMP13P45452 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
MMP13P45452 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
MMP13P45452 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.13■□□□□ 0.17
MMP13P45452 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
MMP13P45452 AC025048.3-201ENST00000590609 569 ntBASIC16.13■□□□□ 0.17
MMP13P45452 AC005498.2-205ENST00000593218 784 ntBASIC16.13■□□□□ 0.17
MMP13P45452 AC005702.4-201ENST00000618393 416 ntBASIC16.13■□□□□ 0.17
MMP13P45452 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.13■□□□□ 0.17
MMP13P45452 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
MMP13P45452 AC041040.2-201ENST00000622926 2899 ntBASIC16.13■□□□□ 0.17
MMP13P45452 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
MMP13P45452 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
MMP13P45452 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
MMP13P45452 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
MMP13P45452 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC16.13■□□□□ 0.17
MMP13P45452 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC16.13■□□□□ 0.17
MMP13P45452 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
MMP13P45452 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
MMP13P45452 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.13■□□□□ 0.17
MMP13P45452 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
MMP13P45452 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
MMP13P45452 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC16.13■□□□□ 0.17
MMP13P45452 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
MMP13P45452 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.13■□□□□ 0.17
MMP13P45452 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
MMP13P45452 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.13■□□□□ 0.17
MMP13P45452 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
MMP13P45452 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
MMP13P45452 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC16.12■□□□□ 0.17
MMP13P45452 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
MMP13P45452 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MMP13P45452 AC005840.4-201ENST00000541242 2494 ntBASIC16.12■□□□□ 0.17
MMP13P45452 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC16.12■□□□□ 0.17
MMP13P45452 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MMP13P45452 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MMP13P45452 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MMP13P45452 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MMP13P45452 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MMP13P45452 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC16.12■□□□□ 0.17
MMP13P45452 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.12■□□□□ 0.17
MMP13P45452 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.12■□□□□ 0.17
MMP13P45452 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC16.12■□□□□ 0.17
MMP13P45452 TSSK5P-201ENST00000423978 907 ntBASIC16.12■□□□□ 0.17
MMP13P45452 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC16.12■□□□□ 0.17
MMP13P45452 TARDBPP1-201ENST00000442013 1203 ntBASIC16.12■□□□□ 0.17
MMP13P45452 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
MMP13P45452 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.12■□□□□ 0.17
MMP13P45452 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.12■□□□□ 0.17
MMP13P45452 AC093214.1-201ENST00000511688 1107 ntBASIC16.12■□□□□ 0.17
MMP13P45452 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.12■□□□□ 0.17
MMP13P45452 DUT-210ENST00000559935 569 ntTSL 3 BASIC16.12■□□□□ 0.17
MMP13P45452 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.12■□□□□ 0.17
MMP13P45452 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
MMP13P45452 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MMP13P45452 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.12■□□□□ 0.17
MMP13P45452 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC16.12■□□□□ 0.17
MMP13P45452 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MMP13P45452 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.12■□□□□ 0.17
MMP13P45452 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms