Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
USP6P35125 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
USP6P35125 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
USP6P35125 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC20.49■□□□□ 0.87
USP6P35125 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC20.49■□□□□ 0.87
USP6P35125 AK6-201ENST00000380818 1183 ntTSL 2 BASIC20.49■□□□□ 0.87
USP6P35125 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
USP6P35125 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
USP6P35125 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC20.49■□□□□ 0.87
USP6P35125 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC20.49■□□□□ 0.87
USP6P35125 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC20.49■□□□□ 0.87
USP6P35125 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC20.49■□□□□ 0.87
USP6P35125 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC20.49■□□□□ 0.87
USP6P35125 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
USP6P35125 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC20.49■□□□□ 0.87
USP6P35125 CDK7-214ENST00000626796 358 ntTSL 5 BASIC20.49■□□□□ 0.87
USP6P35125 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC20.49■□□□□ 0.87
USP6P35125 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
USP6P35125 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
USP6P35125 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
USP6P35125 AC092850.2-201ENST00000623821 2697 ntBASIC20.49■□□□□ 0.87
USP6P35125 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
USP6P35125 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC20.49■□□□□ 0.87
USP6P35125 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
USP6P35125 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
USP6P35125 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
USP6P35125 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC20.48■□□□□ 0.87
USP6P35125 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
USP6P35125 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
USP6P35125 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
USP6P35125 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
USP6P35125 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC20.48■□□□□ 0.87
USP6P35125 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.48■□□□□ 0.87
USP6P35125 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
USP6P35125 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC20.48■□□□□ 0.87
USP6P35125 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
USP6P35125 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
USP6P35125 MPV17-204ENST00000399052 749 ntTSL 4 BASIC20.48■□□□□ 0.87
USP6P35125 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC20.48■□□□□ 0.87
USP6P35125 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC20.48■□□□□ 0.87
USP6P35125 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC20.48■□□□□ 0.87
USP6P35125 PDIA3P2-201ENST00000428073 158 ntBASIC20.48■□□□□ 0.87
USP6P35125 KLF2P1-201ENST00000447438 1042 ntBASIC20.48■□□□□ 0.87
USP6P35125 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC20.48■□□□□ 0.87
USP6P35125 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC20.48■□□□□ 0.87
USP6P35125 AC116345.2-201ENST00000512837 523 ntBASIC20.48■□□□□ 0.87
USP6P35125 AP000346.4-201ENST00000614827 381 ntBASIC20.48■□□□□ 0.87
USP6P35125 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC20.48■□□□□ 0.87
USP6P35125 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
USP6P35125 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC20.48■□□□□ 0.87
USP6P35125 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
USP6P35125 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
USP6P35125 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
USP6P35125 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
USP6P35125 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC20.48■□□□□ 0.87
USP6P35125 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
USP6P35125 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
USP6P35125 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
USP6P35125 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
USP6P35125 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
USP6P35125 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
USP6P35125 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
USP6P35125 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
USP6P35125 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
USP6P35125 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
USP6P35125 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC20.47■□□□□ 0.87
USP6P35125 CMC1-204ENST00000423894 549 ntTSL 2 BASIC20.47■□□□□ 0.87
USP6P35125 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
USP6P35125 RPL18P13-201ENST00000478088 569 ntBASIC20.47■□□□□ 0.87
USP6P35125 HLA-J-204ENST00000495278 958 ntBASIC20.47■□□□□ 0.87
USP6P35125 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
USP6P35125 AC009779.1-201ENST00000551138 283 ntBASIC20.47■□□□□ 0.87
USP6P35125 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC20.47■□□□□ 0.87
USP6P35125 PRKXP1-201ENST00000561423 1122 ntBASIC20.47■□□□□ 0.87
USP6P35125 AL132994.2-201ENST00000603120 687 ntBASIC20.47■□□□□ 0.87
USP6P35125 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC20.47■□□□□ 0.87
USP6P35125 MIR6727-201ENST00000620702 65 ntBASIC20.47■□□□□ 0.87
USP6P35125 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
USP6P35125 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
USP6P35125 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
USP6P35125 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
USP6P35125 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
USP6P35125 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC20.47■□□□□ 0.87
USP6P35125 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
USP6P35125 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
USP6P35125 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
USP6P35125 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
USP6P35125 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
USP6P35125 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC20.46■□□□□ 0.87
USP6P35125 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
USP6P35125 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
USP6P35125 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
USP6P35125 ISCA2P1-201ENST00000425548 448 ntBASIC20.46■□□□□ 0.87
USP6P35125 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
USP6P35125 Z97180.1-201ENST00000445173 988 ntBASIC20.46■□□□□ 0.87
USP6P35125 RPS2P36-201ENST00000456516 831 ntBASIC20.46■□□□□ 0.87
USP6P35125 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC20.46■□□□□ 0.87
USP6P35125 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC20.46■□□□□ 0.87
USP6P35125 SNORD3B-2-202ENST00000571722 791 ntBASIC20.46■□□□□ 0.87
USP6P35125 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms