Protein–RNA interactions for Protein: P35052

GPC1, Glypican-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1P35052 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
GPC1P35052 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
GPC1P35052 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
GPC1P35052 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
GPC1P35052 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
GPC1P35052 TUBB3P1-201ENST00000405796 1332 ntBASIC14.79□□□□□ -0.04
GPC1P35052 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC14.79□□□□□ -0.04
GPC1P35052 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.79□□□□□ -0.04
GPC1P35052 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC14.79□□□□□ -0.04
GPC1P35052 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
GPC1P35052 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
GPC1P35052 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.79□□□□□ -0.04
GPC1P35052 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
GPC1P35052 AC125807.1-201ENST00000483097 614 ntBASIC14.79□□□□□ -0.04
GPC1P35052 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.79□□□□□ -0.04
GPC1P35052 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.79□□□□□ -0.04
GPC1P35052 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
GPC1P35052 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC14.79□□□□□ -0.04
GPC1P35052 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.79□□□□□ -0.04
GPC1P35052 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
GPC1P35052 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.79□□□□□ -0.04
GPC1P35052 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
GPC1P35052 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
GPC1P35052 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.79□□□□□ -0.04
GPC1P35052 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
GPC1P35052 AC006213.4-201ENST00000616184 634 ntBASIC14.79□□□□□ -0.04
GPC1P35052 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.79□□□□□ -0.04
GPC1P35052 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC14.79□□□□□ -0.04
GPC1P35052 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
GPC1P35052 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
GPC1P35052 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
GPC1P35052 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
GPC1P35052 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
GPC1P35052 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
GPC1P35052 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
GPC1P35052 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
GPC1P35052 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
GPC1P35052 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
GPC1P35052 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
GPC1P35052 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.78□□□□□ -0.04
GPC1P35052 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
GPC1P35052 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
GPC1P35052 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
GPC1P35052 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
GPC1P35052 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
GPC1P35052 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.78□□□□□ -0.04
GPC1P35052 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
GPC1P35052 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.78□□□□□ -0.04
GPC1P35052 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.78□□□□□ -0.04
GPC1P35052 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
GPC1P35052 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
GPC1P35052 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
GPC1P35052 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
GPC1P35052 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
GPC1P35052 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
GPC1P35052 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
GPC1P35052 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
GPC1P35052 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.78□□□□□ -0.04
GPC1P35052 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC14.78□□□□□ -0.04
GPC1P35052 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
GPC1P35052 TARDBPP1-201ENST00000442013 1203 ntBASIC14.78□□□□□ -0.04
GPC1P35052 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
GPC1P35052 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC14.78□□□□□ -0.04
GPC1P35052 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.78□□□□□ -0.04
GPC1P35052 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC14.78□□□□□ -0.04
GPC1P35052 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.78□□□□□ -0.04
GPC1P35052 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC14.78□□□□□ -0.04
GPC1P35052 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.78□□□□□ -0.04
GPC1P35052 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC14.78□□□□□ -0.04
GPC1P35052 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
GPC1P35052 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
GPC1P35052 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.78□□□□□ -0.04
GPC1P35052 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.78□□□□□ -0.04
GPC1P35052 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.78□□□□□ -0.04
GPC1P35052 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
GPC1P35052 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
GPC1P35052 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
GPC1P35052 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
GPC1P35052 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
GPC1P35052 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
GPC1P35052 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.78□□□□□ -0.04
GPC1P35052 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
GPC1P35052 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
GPC1P35052 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
GPC1P35052 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
GPC1P35052 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
GPC1P35052 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.78□□□□□ -0.04
GPC1P35052 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.78□□□□□ -0.04
GPC1P35052 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.78□□□□□ -0.04
GPC1P35052 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.78□□□□□ -0.04
GPC1P35052 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
GPC1P35052 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
GPC1P35052 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
GPC1P35052 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.78□□□□□ -0.04
GPC1P35052 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.78□□□□□ -0.04
GPC1P35052 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
GPC1P35052 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
GPC1P35052 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.77□□□□□ -0.04
GPC1P35052 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC14.77□□□□□ -0.04
GPC1P35052 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms