Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 Z98259.2-201ENST00000641583 609 ntBASIC18.63■□□□□ 0.57
KCNA3P22001 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
KCNA3P22001 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
KCNA3P22001 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
KCNA3P22001 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC18.63■□□□□ 0.57
KCNA3P22001 AC124067.4-201ENST00000519691 2379 ntBASIC18.63■□□□□ 0.57
KCNA3P22001 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.63■□□□□ 0.57
KCNA3P22001 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
KCNA3P22001 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
KCNA3P22001 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
KCNA3P22001 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC18.63■□□□□ 0.57
KCNA3P22001 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
KCNA3P22001 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
KCNA3P22001 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
KCNA3P22001 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
KCNA3P22001 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
KCNA3P22001 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
KCNA3P22001 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
KCNA3P22001 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
KCNA3P22001 AC136759.1-202ENST00000530858 2194 ntBASIC18.62■□□□□ 0.57
KCNA3P22001 PRORSD1P-202ENST00000563365 2154 ntBASIC18.62■□□□□ 0.57
KCNA3P22001 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
KCNA3P22001 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
KCNA3P22001 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
KCNA3P22001 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
KCNA3P22001 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
KCNA3P22001 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
KCNA3P22001 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
KCNA3P22001 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
KCNA3P22001 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
KCNA3P22001 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
KCNA3P22001 AC026320.2-201ENST00000434379 478 ntBASIC18.62■□□□□ 0.57
KCNA3P22001 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC18.62■□□□□ 0.57
KCNA3P22001 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC18.62■□□□□ 0.57
KCNA3P22001 NDUFS6P1-201ENST00000485187 316 ntBASIC18.62■□□□□ 0.57
KCNA3P22001 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC18.62■□□□□ 0.57
KCNA3P22001 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
KCNA3P22001 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC18.62■□□□□ 0.57
KCNA3P22001 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC18.62■□□□□ 0.57
KCNA3P22001 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC18.62■□□□□ 0.57
KCNA3P22001 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
KCNA3P22001 AL132780.4-201ENST00000624870 1135 ntBASIC18.62■□□□□ 0.57
KCNA3P22001 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
KCNA3P22001 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
KCNA3P22001 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
KCNA3P22001 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
KCNA3P22001 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC18.62■□□□□ 0.57
KCNA3P22001 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC18.62■□□□□ 0.57
KCNA3P22001 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
KCNA3P22001 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
KCNA3P22001 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
KCNA3P22001 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
KCNA3P22001 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
KCNA3P22001 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
KCNA3P22001 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
KCNA3P22001 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
KCNA3P22001 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
KCNA3P22001 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
KCNA3P22001 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
KCNA3P22001 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
KCNA3P22001 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
KCNA3P22001 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC18.61■□□□□ 0.57
KCNA3P22001 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
KCNA3P22001 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC18.61■□□□□ 0.57
KCNA3P22001 KRT8P21-201ENST00000430398 1491 ntBASIC18.61■□□□□ 0.57
KCNA3P22001 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
KCNA3P22001 AL008718.2-201ENST00000609206 1313 ntBASIC18.61■□□□□ 0.57
KCNA3P22001 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
KCNA3P22001 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
KCNA3P22001 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC18.61■□□□□ 0.57
KCNA3P22001 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC18.61■□□□□ 0.57
KCNA3P22001 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC18.61■□□□□ 0.57
KCNA3P22001 CDC23-208ENST00000505120 455 ntTSL 3 BASIC18.61■□□□□ 0.57
KCNA3P22001 CCNC-217ENST00000523985 958 ntTSL 2 BASIC18.61■□□□□ 0.57
KCNA3P22001 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC18.61■□□□□ 0.57
KCNA3P22001 AC005632.3-201ENST00000605544 308 ntBASIC18.61■□□□□ 0.57
KCNA3P22001 AC138696.2-201ENST00000607376 223 ntBASIC18.61■□□□□ 0.57
KCNA3P22001 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
KCNA3P22001 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
KCNA3P22001 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.61■□□□□ 0.57
KCNA3P22001 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.61■□□□□ 0.57
KCNA3P22001 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
KCNA3P22001 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
KCNA3P22001 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
KCNA3P22001 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
KCNA3P22001 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
KCNA3P22001 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
KCNA3P22001 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
KCNA3P22001 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
KCNA3P22001 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
KCNA3P22001 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
KCNA3P22001 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
KCNA3P22001 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
KCNA3P22001 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
KCNA3P22001 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
KCNA3P22001 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
KCNA3P22001 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
KCNA3P22001 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
KCNA3P22001 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
KCNA3P22001 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms