Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
PDGFRAP16234 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
PDGFRAP16234 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PDGFRAP16234 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
PDGFRAP16234 OSM-203ENST00000403463 464 ntTSL 3 BASIC16.26■□□□□ 0.19
PDGFRAP16234 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PDGFRAP16234 PFN2-205ENST00000461868 613 ntTSL 2 BASIC16.26■□□□□ 0.19
PDGFRAP16234 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.26■□□□□ 0.19
PDGFRAP16234 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC16.26■□□□□ 0.19
PDGFRAP16234 CDK4-206ENST00000549606 558 ntTSL 2 BASIC16.26■□□□□ 0.19
PDGFRAP16234 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC16.26■□□□□ 0.19
PDGFRAP16234 AC023310.3-201ENST00000557027 670 ntBASIC16.26■□□□□ 0.19
PDGFRAP16234 AC100756.1-201ENST00000562736 682 ntBASIC16.26■□□□□ 0.19
PDGFRAP16234 AC138749.3-201ENST00000567691 622 ntBASIC16.26■□□□□ 0.19
PDGFRAP16234 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC16.26■□□□□ 0.19
PDGFRAP16234 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC16.26■□□□□ 0.19
PDGFRAP16234 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PDGFRAP16234 AL391069.4-201ENST00000609583 481 ntBASIC16.26■□□□□ 0.19
PDGFRAP16234 AC116165.1-201ENST00000611806 668 ntBASIC16.26■□□□□ 0.19
PDGFRAP16234 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC16.26■□□□□ 0.19
PDGFRAP16234 CLK3P2-201ENST00000427566 1453 ntBASIC16.26■□□□□ 0.19
PDGFRAP16234 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC16.26■□□□□ 0.19
PDGFRAP16234 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PDGFRAP16234 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PDGFRAP16234 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC16.26■□□□□ 0.19
PDGFRAP16234 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
PDGFRAP16234 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC16.26■□□□□ 0.19
PDGFRAP16234 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PDGFRAP16234 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.26■□□□□ 0.19
PDGFRAP16234 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PDGFRAP16234 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
PDGFRAP16234 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PDGFRAP16234 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PDGFRAP16234 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PDGFRAP16234 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PDGFRAP16234 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC16.25■□□□□ 0.19
PDGFRAP16234 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PDGFRAP16234 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
PDGFRAP16234 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PDGFRAP16234 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PDGFRAP16234 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
PDGFRAP16234 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PDGFRAP16234 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
PDGFRAP16234 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PDGFRAP16234 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PDGFRAP16234 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PDGFRAP16234 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PDGFRAP16234 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PDGFRAP16234 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
PDGFRAP16234 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC16.25■□□□□ 0.19
PDGFRAP16234 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC16.25■□□□□ 0.19
PDGFRAP16234 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC16.25■□□□□ 0.19
PDGFRAP16234 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC16.25■□□□□ 0.19
PDGFRAP16234 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC16.25■□□□□ 0.19
PDGFRAP16234 RARRES2P5-201ENST00000564013 466 ntBASIC16.25■□□□□ 0.19
PDGFRAP16234 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PDGFRAP16234 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
PDGFRAP16234 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC16.25■□□□□ 0.19
PDGFRAP16234 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PDGFRAP16234 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
PDGFRAP16234 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PDGFRAP16234 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
PDGFRAP16234 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PDGFRAP16234 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PDGFRAP16234 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.25■□□□□ 0.19
PDGFRAP16234 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PDGFRAP16234 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PDGFRAP16234 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PDGFRAP16234 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PDGFRAP16234 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PDGFRAP16234 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PDGFRAP16234 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PDGFRAP16234 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PDGFRAP16234 ZEB1-AS1-208ENST00000607166 2503 ntBASIC16.24■□□□□ 0.19
PDGFRAP16234 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PDGFRAP16234 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PDGFRAP16234 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PDGFRAP16234 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC16.24■□□□□ 0.19
PDGFRAP16234 MECR-202ENST00000373791 2416 ntTSL 2 BASIC16.24■□□□□ 0.19
PDGFRAP16234 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PDGFRAP16234 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PDGFRAP16234 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PDGFRAP16234 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
PDGFRAP16234 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
PDGFRAP16234 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC16.24■□□□□ 0.19
PDGFRAP16234 RHOA-206ENST00000454011 889 ntTSL 2 BASIC16.24■□□□□ 0.19
PDGFRAP16234 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC16.24■□□□□ 0.19
PDGFRAP16234 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC16.24■□□□□ 0.19
PDGFRAP16234 CD81-207ENST00000481687 890 ntTSL 2 BASIC16.24■□□□□ 0.19
PDGFRAP16234 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC16.24■□□□□ 0.19
PDGFRAP16234 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PDGFRAP16234 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC16.24■□□□□ 0.19
PDGFRAP16234 GPX4-206ENST00000588919 803 ntTSL 2 BASIC16.24■□□□□ 0.19
PDGFRAP16234 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC16.24■□□□□ 0.19
PDGFRAP16234 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC16.24■□□□□ 0.19
PDGFRAP16234 AL662799.1-202ENST00000614205 422 ntBASIC16.24■□□□□ 0.19
PDGFRAP16234 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC16.24■□□□□ 0.19
PDGFRAP16234 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PDGFRAP16234 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PDGFRAP16234 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms