Protein–RNA interactions for Protein: P0DP08

IGHV4-38-2, Immunoglobulin heavy variable 4-38-2, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-38-2P0DP08 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC12.45□□□□□ -0.42
IGHV4-38-2P0DP08 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC12.45□□□□□ -0.42
IGHV4-38-2P0DP08 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
IGHV4-38-2P0DP08 AGER-214ENST00000538695 487 ntTSL 2 BASIC12.45□□□□□ -0.42
IGHV4-38-2P0DP08 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
IGHV4-38-2P0DP08 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
IGHV4-38-2P0DP08 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC12.45□□□□□ -0.42
IGHV4-38-2P0DP08 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC12.45□□□□□ -0.42
IGHV4-38-2P0DP08 DERL2-202ENST00000570848 657 ntTSL 5 BASIC12.45□□□□□ -0.42
IGHV4-38-2P0DP08 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC12.45□□□□□ -0.42
IGHV4-38-2P0DP08 MIR4741-201ENST00000579822 90 ntBASIC12.45□□□□□ -0.42
IGHV4-38-2P0DP08 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
IGHV4-38-2P0DP08 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC12.45□□□□□ -0.42
IGHV4-38-2P0DP08 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
IGHV4-38-2P0DP08 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC12.45□□□□□ -0.42
IGHV4-38-2P0DP08 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC12.45□□□□□ -0.42
IGHV4-38-2P0DP08 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC12.45□□□□□ -0.42
IGHV4-38-2P0DP08 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC12.45□□□□□ -0.42
IGHV4-38-2P0DP08 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
IGHV4-38-2P0DP08 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
IGHV4-38-2P0DP08 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
IGHV4-38-2P0DP08 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
IGHV4-38-2P0DP08 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
IGHV4-38-2P0DP08 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
IGHV4-38-2P0DP08 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
IGHV4-38-2P0DP08 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC12.45□□□□□ -0.42
IGHV4-38-2P0DP08 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
IGHV4-38-2P0DP08 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC12.45□□□□□ -0.42
IGHV4-38-2P0DP08 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
IGHV4-38-2P0DP08 FLJ16779-201ENST00000612722 7638 ntBASIC12.45□□□□□ -0.42
IGHV4-38-2P0DP08 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
IGHV4-38-2P0DP08 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
IGHV4-38-2P0DP08 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC12.45□□□□□ -0.42
IGHV4-38-2P0DP08 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
IGHV4-38-2P0DP08 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
IGHV4-38-2P0DP08 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
IGHV4-38-2P0DP08 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
IGHV4-38-2P0DP08 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC12.45□□□□□ -0.42
IGHV4-38-2P0DP08 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC12.45□□□□□ -0.42
IGHV4-38-2P0DP08 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
IGHV4-38-2P0DP08 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
IGHV4-38-2P0DP08 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
IGHV4-38-2P0DP08 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
IGHV4-38-2P0DP08 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
IGHV4-38-2P0DP08 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
IGHV4-38-2P0DP08 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
IGHV4-38-2P0DP08 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC12.44□□□□□ -0.42
IGHV4-38-2P0DP08 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
IGHV4-38-2P0DP08 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
IGHV4-38-2P0DP08 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC12.44□□□□□ -0.42
IGHV4-38-2P0DP08 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
IGHV4-38-2P0DP08 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC12.44□□□□□ -0.42
IGHV4-38-2P0DP08 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
IGHV4-38-2P0DP08 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
IGHV4-38-2P0DP08 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
IGHV4-38-2P0DP08 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
IGHV4-38-2P0DP08 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
IGHV4-38-2P0DP08 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
IGHV4-38-2P0DP08 TNRC18P3-201ENST00000441896 2691 ntBASIC12.44□□□□□ -0.42
IGHV4-38-2P0DP08 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
IGHV4-38-2P0DP08 RPS15-201ENST00000233609 534 ntTSL 2 BASIC12.44□□□□□ -0.42
IGHV4-38-2P0DP08 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC12.44□□□□□ -0.42
IGHV4-38-2P0DP08 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
IGHV4-38-2P0DP08 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC12.44□□□□□ -0.42
IGHV4-38-2P0DP08 PFN1P12-201ENST00000455938 534 ntBASIC12.44□□□□□ -0.42
IGHV4-38-2P0DP08 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
IGHV4-38-2P0DP08 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
IGHV4-38-2P0DP08 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC12.44□□□□□ -0.42
IGHV4-38-2P0DP08 RPS15-205ENST00000586686 562 ntTSL 5 BASIC12.44□□□□□ -0.42
IGHV4-38-2P0DP08 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC12.44□□□□□ -0.42
IGHV4-38-2P0DP08 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC12.44□□□□□ -0.42
IGHV4-38-2P0DP08 RPS15-208ENST00000591804 711 ntTSL 5 BASIC12.44□□□□□ -0.42
IGHV4-38-2P0DP08 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
IGHV4-38-2P0DP08 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC12.44□□□□□ -0.42
IGHV4-38-2P0DP08 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC12.44□□□□□ -0.42
IGHV4-38-2P0DP08 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC12.44□□□□□ -0.42
IGHV4-38-2P0DP08 AC091271.1-201ENST00000611877 1162 ntBASIC12.44□□□□□ -0.42
IGHV4-38-2P0DP08 AC006453.4-201ENST00000636949 1252 ntBASIC12.44□□□□□ -0.42
IGHV4-38-2P0DP08 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC12.44□□□□□ -0.42
IGHV4-38-2P0DP08 PRSS30P-206ENST00000641773 873 ntBASIC12.44□□□□□ -0.42
IGHV4-38-2P0DP08 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
IGHV4-38-2P0DP08 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
IGHV4-38-2P0DP08 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
IGHV4-38-2P0DP08 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC12.44□□□□□ -0.42
IGHV4-38-2P0DP08 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
IGHV4-38-2P0DP08 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
IGHV4-38-2P0DP08 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC12.44□□□□□ -0.42
IGHV4-38-2P0DP08 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
IGHV4-38-2P0DP08 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
IGHV4-38-2P0DP08 AP005117.1-202ENST00000581724 1908 ntBASIC12.44□□□□□ -0.42
IGHV4-38-2P0DP08 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC12.44□□□□□ -0.42
IGHV4-38-2P0DP08 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
IGHV4-38-2P0DP08 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
IGHV4-38-2P0DP08 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
IGHV4-38-2P0DP08 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
IGHV4-38-2P0DP08 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
IGHV4-38-2P0DP08 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
IGHV4-38-2P0DP08 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
IGHV4-38-2P0DP08 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC12.44□□□□□ -0.42
IGHV4-38-2P0DP08 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms