Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
FAM228BP0C875 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
FAM228BP0C875 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC16.52■□□□□ 0.23
FAM228BP0C875 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC16.52■□□□□ 0.23
FAM228BP0C875 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC16.52■□□□□ 0.23
FAM228BP0C875 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
FAM228BP0C875 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC16.52■□□□□ 0.23
FAM228BP0C875 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
FAM228BP0C875 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC16.52■□□□□ 0.23
FAM228BP0C875 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
FAM228BP0C875 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
FAM228BP0C875 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
FAM228BP0C875 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
FAM228BP0C875 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
FAM228BP0C875 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
FAM228BP0C875 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
FAM228BP0C875 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
FAM228BP0C875 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
FAM228BP0C875 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
FAM228BP0C875 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC16.51■□□□□ 0.23
FAM228BP0C875 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
FAM228BP0C875 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
FAM228BP0C875 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
FAM228BP0C875 AC018529.2-202ENST00000611482 3087 ntBASIC16.51■□□□□ 0.23
FAM228BP0C875 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC16.51■□□□□ 0.23
FAM228BP0C875 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC16.51■□□□□ 0.23
FAM228BP0C875 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC16.51■□□□□ 0.23
FAM228BP0C875 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
FAM228BP0C875 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC16.51■□□□□ 0.23
FAM228BP0C875 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
FAM228BP0C875 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
FAM228BP0C875 TOMM22P5-201ENST00000416399 439 ntBASIC16.51■□□□□ 0.23
FAM228BP0C875 CNN2P11-201ENST00000429351 262 ntBASIC16.51■□□□□ 0.23
FAM228BP0C875 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC16.51■□□□□ 0.23
FAM228BP0C875 PFN2-205ENST00000461868 613 ntTSL 2 BASIC16.51■□□□□ 0.23
FAM228BP0C875 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.51■□□□□ 0.23
FAM228BP0C875 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.51■□□□□ 0.23
FAM228BP0C875 TEX28P1-201ENST00000613479 1221 ntBASIC16.51■□□□□ 0.23
FAM228BP0C875 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
FAM228BP0C875 TEX28P2-201ENST00000617764 1221 ntBASIC16.51■□□□□ 0.23
FAM228BP0C875 SPDYE12P-201ENST00000618416 771 ntBASIC16.51■□□□□ 0.23
FAM228BP0C875 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
FAM228BP0C875 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
FAM228BP0C875 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC16.51■□□□□ 0.23
FAM228BP0C875 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
FAM228BP0C875 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC16.51■□□□□ 0.23
FAM228BP0C875 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
FAM228BP0C875 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
FAM228BP0C875 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
FAM228BP0C875 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
FAM228BP0C875 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC16.51■□□□□ 0.23
FAM228BP0C875 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
FAM228BP0C875 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC16.51■□□□□ 0.23
FAM228BP0C875 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
FAM228BP0C875 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
FAM228BP0C875 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FAM228BP0C875 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
FAM228BP0C875 AL121723.1-201ENST00000445194 1519 ntBASIC16.5■□□□□ 0.23
FAM228BP0C875 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FAM228BP0C875 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
FAM228BP0C875 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FAM228BP0C875 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FAM228BP0C875 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
FAM228BP0C875 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FAM228BP0C875 AC012508.2-201ENST00000567613 1472 ntBASIC16.5■□□□□ 0.23
FAM228BP0C875 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
FAM228BP0C875 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FAM228BP0C875 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FAM228BP0C875 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FAM228BP0C875 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
FAM228BP0C875 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
FAM228BP0C875 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
FAM228BP0C875 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.5■□□□□ 0.23
FAM228BP0C875 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC16.5■□□□□ 0.23
FAM228BP0C875 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC16.5■□□□□ 0.23
FAM228BP0C875 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FAM228BP0C875 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.5■□□□□ 0.23
FAM228BP0C875 HLA-V-204ENST00000476601 1289 ntBASIC16.5■□□□□ 0.23
FAM228BP0C875 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.5■□□□□ 0.23
FAM228BP0C875 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.5■□□□□ 0.23
FAM228BP0C875 AC109322.1-201ENST00000524499 1264 ntBASIC16.5■□□□□ 0.23
FAM228BP0C875 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.5■□□□□ 0.23
FAM228BP0C875 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC16.5■□□□□ 0.23
FAM228BP0C875 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
FAM228BP0C875 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.5■□□□□ 0.23
FAM228BP0C875 CBFB-203ENST00000561924 584 ntTSL 5 BASIC16.5■□□□□ 0.23
FAM228BP0C875 AC010336.2-201ENST00000564226 506 ntBASIC16.5■□□□□ 0.23
FAM228BP0C875 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
FAM228BP0C875 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
FAM228BP0C875 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.5■□□□□ 0.23
FAM228BP0C875 AL645728.2-202ENST00000641679 227 ntBASIC16.5■□□□□ 0.23
FAM228BP0C875 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FAM228BP0C875 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FAM228BP0C875 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.5■□□□□ 0.23
FAM228BP0C875 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
FAM228BP0C875 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
FAM228BP0C875 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
FAM228BP0C875 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
FAM228BP0C875 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
FAM228BP0C875 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms