Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
THBS1P07996 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC14.29□□□□□ -0.12
THBS1P07996 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.29□□□□□ -0.12
THBS1P07996 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
THBS1P07996 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
THBS1P07996 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
THBS1P07996 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
THBS1P07996 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
THBS1P07996 AC126755.1-201ENST00000525846 6405 ntBASIC14.29□□□□□ -0.12
THBS1P07996 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
THBS1P07996 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
THBS1P07996 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
THBS1P07996 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.29□□□□□ -0.12
THBS1P07996 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
THBS1P07996 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
THBS1P07996 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
THBS1P07996 LINC00528-201ENST00000600723 2160 ntBASIC14.29□□□□□ -0.12
THBS1P07996 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
THBS1P07996 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
THBS1P07996 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
THBS1P07996 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
THBS1P07996 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
THBS1P07996 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
THBS1P07996 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
THBS1P07996 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
THBS1P07996 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
THBS1P07996 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
THBS1P07996 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
THBS1P07996 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
THBS1P07996 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
THBS1P07996 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
THBS1P07996 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.28□□□□□ -0.12
THBS1P07996 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
THBS1P07996 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.28□□□□□ -0.12
THBS1P07996 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
THBS1P07996 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC14.28□□□□□ -0.12
THBS1P07996 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
THBS1P07996 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
THBS1P07996 AC092580.3-201ENST00000430932 139 ntBASIC14.28□□□□□ -0.12
THBS1P07996 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC14.28□□□□□ -0.12
THBS1P07996 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.28□□□□□ -0.12
THBS1P07996 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
THBS1P07996 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.28□□□□□ -0.12
THBS1P07996 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC14.28□□□□□ -0.12
THBS1P07996 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.28□□□□□ -0.12
THBS1P07996 RNA5SP421-201ENST00000516864 134 ntBASIC14.28□□□□□ -0.12
THBS1P07996 DUX4L27-201ENST00000554796 1261 ntBASIC14.28□□□□□ -0.12
THBS1P07996 GREM1-201ENST00000560677 623 ntTSL 4 BASIC14.28□□□□□ -0.12
THBS1P07996 MPI-209ENST00000564003 1195 ntTSL 2 BASIC14.28□□□□□ -0.12
THBS1P07996 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
THBS1P07996 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC14.28□□□□□ -0.12
THBS1P07996 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.28□□□□□ -0.12
THBS1P07996 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC14.28□□□□□ -0.12
THBS1P07996 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC14.28□□□□□ -0.12
THBS1P07996 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.28□□□□□ -0.12
THBS1P07996 CICP24-201ENST00000605464 2705 ntBASIC14.28□□□□□ -0.12
THBS1P07996 AL844908.2-201ENST00000609461 460 ntBASIC14.28□□□□□ -0.12
THBS1P07996 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
THBS1P07996 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
THBS1P07996 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.28□□□□□ -0.12
THBS1P07996 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
THBS1P07996 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
THBS1P07996 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
THBS1P07996 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
THBS1P07996 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
THBS1P07996 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
THBS1P07996 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
THBS1P07996 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.28□□□□□ -0.12
THBS1P07996 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
THBS1P07996 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
THBS1P07996 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
THBS1P07996 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
THBS1P07996 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
THBS1P07996 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
THBS1P07996 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
THBS1P07996 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
THBS1P07996 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
THBS1P07996 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
THBS1P07996 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
THBS1P07996 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC14.27□□□□□ -0.12
THBS1P07996 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.27□□□□□ -0.12
THBS1P07996 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
THBS1P07996 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
THBS1P07996 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
THBS1P07996 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
THBS1P07996 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
THBS1P07996 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC14.27□□□□□ -0.12
THBS1P07996 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
THBS1P07996 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
THBS1P07996 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
THBS1P07996 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.12
THBS1P07996 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
THBS1P07996 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.27□□□□□ -0.12
THBS1P07996 AC012508.2-201ENST00000567613 1472 ntBASIC14.27□□□□□ -0.12
THBS1P07996 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
THBS1P07996 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
THBS1P07996 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
THBS1P07996 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
THBS1P07996 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
THBS1P07996 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms