Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
PDGFAP04085 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDGFAP04085 AC005915.1-201ENST00000624912 2018 ntBASIC14.57□□□□□ -0.08
PDGFAP04085 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDGFAP04085 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDGFAP04085 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC14.57□□□□□ -0.08
PDGFAP04085 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDGFAP04085 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
PDGFAP04085 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PDGFAP04085 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PDGFAP04085 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDGFAP04085 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC14.57□□□□□ -0.08
PDGFAP04085 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDGFAP04085 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC14.57□□□□□ -0.08
PDGFAP04085 MSTO2P-201ENST00000314835 1709 ntBASIC14.57□□□□□ -0.08
PDGFAP04085 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDGFAP04085 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDGFAP04085 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDGFAP04085 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDGFAP04085 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.57□□□□□ -0.08
PDGFAP04085 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDGFAP04085 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PDGFAP04085 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDGFAP04085 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDGFAP04085 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDGFAP04085 KRT8P37-201ENST00000451609 1420 ntBASIC14.57□□□□□ -0.08
PDGFAP04085 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDGFAP04085 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
PDGFAP04085 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDGFAP04085 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PDGFAP04085 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
PDGFAP04085 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PDGFAP04085 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
PDGFAP04085 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
PDGFAP04085 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.56□□□□□ -0.08
PDGFAP04085 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
PDGFAP04085 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.56□□□□□ -0.08
PDGFAP04085 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.56□□□□□ -0.08
PDGFAP04085 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
PDGFAP04085 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
PDGFAP04085 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
PDGFAP04085 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PDGFAP04085 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
PDGFAP04085 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PDGFAP04085 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
PDGFAP04085 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC14.56□□□□□ -0.08
PDGFAP04085 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC14.56□□□□□ -0.08
PDGFAP04085 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC14.56□□□□□ -0.08
PDGFAP04085 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PDGFAP04085 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC14.56□□□□□ -0.08
PDGFAP04085 AC068587.10-201ENST00000641210 219 ntBASIC14.56□□□□□ -0.08
PDGFAP04085 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PDGFAP04085 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PDGFAP04085 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PDGFAP04085 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
PDGFAP04085 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.56□□□□□ -0.08
PDGFAP04085 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PDGFAP04085 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PDGFAP04085 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
PDGFAP04085 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PDGFAP04085 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PDGFAP04085 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PDGFAP04085 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
PDGFAP04085 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
PDGFAP04085 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
PDGFAP04085 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
PDGFAP04085 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
PDGFAP04085 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC14.55□□□□□ -0.08
PDGFAP04085 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.55□□□□□ -0.08
PDGFAP04085 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PDGFAP04085 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PDGFAP04085 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PDGFAP04085 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PDGFAP04085 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
PDGFAP04085 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PDGFAP04085 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.55□□□□□ -0.08
PDGFAP04085 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.55□□□□□ -0.08
PDGFAP04085 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PDGFAP04085 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC14.55□□□□□ -0.08
PDGFAP04085 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.55□□□□□ -0.08
PDGFAP04085 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PDGFAP04085 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PDGFAP04085 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PDGFAP04085 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PDGFAP04085 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PDGFAP04085 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PDGFAP04085 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PDGFAP04085 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
PDGFAP04085 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.55□□□□□ -0.08
PDGFAP04085 APOC3-202ENST00000375345 604 ntTSL 5 BASIC14.55□□□□□ -0.08
PDGFAP04085 FAM21FP-201ENST00000426241 1131 ntBASIC14.55□□□□□ -0.08
PDGFAP04085 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
PDGFAP04085 NME4-207ENST00000450036 985 ntTSL 3 BASIC14.55□□□□□ -0.08
PDGFAP04085 AC007551.1-201ENST00000457394 519 ntBASIC14.55□□□□□ -0.08
PDGFAP04085 FTH1P14-201ENST00000482930 551 ntBASIC14.55□□□□□ -0.08
PDGFAP04085 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.55□□□□□ -0.08
PDGFAP04085 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC14.55□□□□□ -0.08
PDGFAP04085 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PDGFAP04085 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC14.55□□□□□ -0.08
PDGFAP04085 AP000812.2-201ENST00000538934 718 ntBASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms