Protein–RNA interactions for Protein: P00374

DHFR, Dihydrofolate reductase, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHFRP00374 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
DHFRP00374 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC13.5□□□□□ -0.25
DHFRP00374 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC13.5□□□□□ -0.25
DHFRP00374 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
DHFRP00374 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC13.5□□□□□ -0.25
DHFRP00374 AC127383.1-201ENST00000444697 1800 ntBASIC13.5□□□□□ -0.25
DHFRP00374 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
DHFRP00374 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC13.5□□□□□ -0.25
DHFRP00374 AL356585.2-201ENST00000625078 2396 ntBASIC13.5□□□□□ -0.25
DHFRP00374 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.5□□□□□ -0.25
DHFRP00374 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
DHFRP00374 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
DHFRP00374 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
DHFRP00374 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
DHFRP00374 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC13.49□□□□□ -0.25
DHFRP00374 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
DHFRP00374 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
DHFRP00374 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
DHFRP00374 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC13.49□□□□□ -0.25
DHFRP00374 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
DHFRP00374 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC13.49□□□□□ -0.25
DHFRP00374 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
DHFRP00374 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
DHFRP00374 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
DHFRP00374 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
DHFRP00374 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
DHFRP00374 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC13.49□□□□□ -0.25
DHFRP00374 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
DHFRP00374 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
DHFRP00374 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC13.49□□□□□ -0.25
DHFRP00374 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
DHFRP00374 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
DHFRP00374 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
DHFRP00374 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
DHFRP00374 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.49□□□□□ -0.25
DHFRP00374 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
DHFRP00374 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
DHFRP00374 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
DHFRP00374 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
DHFRP00374 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
DHFRP00374 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC13.49□□□□□ -0.25
DHFRP00374 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
DHFRP00374 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC13.49□□□□□ -0.25
DHFRP00374 MTDHP3-201ENST00000594186 672 ntBASIC13.49□□□□□ -0.25
DHFRP00374 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC13.49□□□□□ -0.25
DHFRP00374 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC13.49□□□□□ -0.25
DHFRP00374 AL589182.2-201ENST00000619332 1049 ntBASIC13.49□□□□□ -0.25
DHFRP00374 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.49□□□□□ -0.25
DHFRP00374 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
DHFRP00374 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
DHFRP00374 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
DHFRP00374 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
DHFRP00374 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
DHFRP00374 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
DHFRP00374 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
DHFRP00374 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
DHFRP00374 USP3-204ENST00000540797 5474 ntTSL 2 BASIC13.49□□□□□ -0.25
DHFRP00374 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
DHFRP00374 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
DHFRP00374 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
DHFRP00374 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
DHFRP00374 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC13.49□□□□□ -0.25
DHFRP00374 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC13.49□□□□□ -0.25
DHFRP00374 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
DHFRP00374 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
DHFRP00374 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
DHFRP00374 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
DHFRP00374 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
DHFRP00374 AC027612.1-201ENST00000445234 2395 ntBASIC13.49□□□□□ -0.25
DHFRP00374 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC13.49□□□□□ -0.25
DHFRP00374 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
DHFRP00374 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
DHFRP00374 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.48□□□□□ -0.25
DHFRP00374 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
DHFRP00374 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
DHFRP00374 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
DHFRP00374 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
DHFRP00374 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
DHFRP00374 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
DHFRP00374 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
DHFRP00374 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC13.48□□□□□ -0.25
DHFRP00374 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC13.48□□□□□ -0.25
DHFRP00374 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC13.48□□□□□ -0.25
DHFRP00374 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
DHFRP00374 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
DHFRP00374 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC13.48□□□□□ -0.25
DHFRP00374 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
DHFRP00374 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.48□□□□□ -0.25
DHFRP00374 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC13.48□□□□□ -0.25
DHFRP00374 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
DHFRP00374 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC13.48□□□□□ -0.25
DHFRP00374 SLC9A3P2-201ENST00000447821 2021 ntBASIC13.48□□□□□ -0.25
DHFRP00374 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
DHFRP00374 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
DHFRP00374 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
DHFRP00374 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC13.48□□□□□ -0.25
DHFRP00374 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
DHFRP00374 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
DHFRP00374 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC13.48□□□□□ -0.25
DHFRP00374 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms