Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLOCKO15516 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CLOCKO15516 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
CLOCKO15516 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLOCKO15516 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CLOCKO15516 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLOCKO15516 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLOCKO15516 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.81□□□□□ -0.04
CLOCKO15516 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.81□□□□□ -0.04
CLOCKO15516 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLOCKO15516 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.81□□□□□ -0.04
CLOCKO15516 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CLOCKO15516 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC14.81□□□□□ -0.04
CLOCKO15516 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CLOCKO15516 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CLOCKO15516 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.81□□□□□ -0.04
CLOCKO15516 LINC01230-201ENST00000625222 3017 ntBASIC14.81□□□□□ -0.04
CLOCKO15516 AC006504.5-208ENST00000588784 2401 ntBASIC14.81□□□□□ -0.04
CLOCKO15516 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CLOCKO15516 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLOCKO15516 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLOCKO15516 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLOCKO15516 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
CLOCKO15516 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLOCKO15516 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CLOCKO15516 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CLOCKO15516 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
CLOCKO15516 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC14.81□□□□□ -0.04
CLOCKO15516 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.81□□□□□ -0.04
CLOCKO15516 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC14.81□□□□□ -0.04
CLOCKO15516 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC14.81□□□□□ -0.04
CLOCKO15516 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.81□□□□□ -0.04
CLOCKO15516 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLOCKO15516 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.81□□□□□ -0.04
CLOCKO15516 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLOCKO15516 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLOCKO15516 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CLOCKO15516 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC14.81□□□□□ -0.04
CLOCKO15516 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CLOCKO15516 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLOCKO15516 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLOCKO15516 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CLOCKO15516 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CLOCKO15516 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
CLOCKO15516 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLOCKO15516 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.81□□□□□ -0.04
CLOCKO15516 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CLOCKO15516 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
CLOCKO15516 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLOCKO15516 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
CLOCKO15516 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLOCKO15516 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC14.81□□□□□ -0.04
CLOCKO15516 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CLOCKO15516 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CLOCKO15516 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
CLOCKO15516 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CLOCKO15516 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CLOCKO15516 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLOCKO15516 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.81□□□□□ -0.04
CLOCKO15516 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLOCKO15516 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CLOCKO15516 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CLOCKO15516 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLOCKO15516 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14.8□□□□□ -0.04
CLOCKO15516 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
CLOCKO15516 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLOCKO15516 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CLOCKO15516 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CLOCKO15516 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CLOCKO15516 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.8□□□□□ -0.04
CLOCKO15516 TNN-203ENST00000622870 3719 ntTSL 5 BASIC14.8□□□□□ -0.04
CLOCKO15516 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLOCKO15516 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLOCKO15516 NEK7-201ENST00000367383 586 ntTSL 2 BASIC14.8□□□□□ -0.04
CLOCKO15516 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLOCKO15516 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC14.8□□□□□ -0.04
CLOCKO15516 PMS2P2-201ENST00000425039 1128 ntBASIC14.8□□□□□ -0.04
CLOCKO15516 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC14.8□□□□□ -0.04
CLOCKO15516 FAM58CP-201ENST00000435741 640 ntBASIC14.8□□□□□ -0.04
CLOCKO15516 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC14.8□□□□□ -0.04
CLOCKO15516 AC074386.1-202ENST00000463561 864 ntBASIC14.8□□□□□ -0.04
CLOCKO15516 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC14.8□□□□□ -0.04
CLOCKO15516 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC14.8□□□□□ -0.04
CLOCKO15516 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
CLOCKO15516 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC14.8□□□□□ -0.04
CLOCKO15516 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.8□□□□□ -0.04
CLOCKO15516 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC14.8□□□□□ -0.04
CLOCKO15516 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC14.8□□□□□ -0.04
CLOCKO15516 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.8□□□□□ -0.04
CLOCKO15516 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
CLOCKO15516 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC14.8□□□□□ -0.04
CLOCKO15516 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLOCKO15516 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLOCKO15516 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLOCKO15516 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLOCKO15516 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLOCKO15516 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CLOCKO15516 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLOCKO15516 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CLOCKO15516 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms