Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC15.54■□□□□ 0.08
CFAP99D6REC4 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.54■□□□□ 0.08
CFAP99D6REC4 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
CFAP99D6REC4 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
CFAP99D6REC4 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
CFAP99D6REC4 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CFAP99D6REC4 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC15.54■□□□□ 0.08
CFAP99D6REC4 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.54■□□□□ 0.08
CFAP99D6REC4 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CFAP99D6REC4 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.54■□□□□ 0.08
CFAP99D6REC4 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CFAP99D6REC4 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC15.54■□□□□ 0.08
CFAP99D6REC4 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CFAP99D6REC4 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
CFAP99D6REC4 PKIG-203ENST00000372887 769 ntTSL 3 BASIC15.54■□□□□ 0.08
CFAP99D6REC4 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CFAP99D6REC4 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CFAP99D6REC4 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CFAP99D6REC4 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CFAP99D6REC4 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC15.54■□□□□ 0.08
CFAP99D6REC4 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CFAP99D6REC4 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC15.54■□□□□ 0.08
CFAP99D6REC4 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CFAP99D6REC4 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CFAP99D6REC4 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.54■□□□□ 0.08
CFAP99D6REC4 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CFAP99D6REC4 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC15.54■□□□□ 0.08
CFAP99D6REC4 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC15.54■□□□□ 0.08
CFAP99D6REC4 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC15.54■□□□□ 0.08
CFAP99D6REC4 AL096865.1-201ENST00000606796 927 ntBASIC15.54■□□□□ 0.08
CFAP99D6REC4 Metazoa_SRP.67-201ENST00000617099 296 ntBASIC15.54■□□□□ 0.08
CFAP99D6REC4 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CFAP99D6REC4 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CFAP99D6REC4 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CFAP99D6REC4 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CFAP99D6REC4 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CFAP99D6REC4 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CFAP99D6REC4 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CFAP99D6REC4 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC15.54■□□□□ 0.08
CFAP99D6REC4 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CFAP99D6REC4 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
CFAP99D6REC4 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.54■□□□□ 0.08
CFAP99D6REC4 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CFAP99D6REC4 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CFAP99D6REC4 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CFAP99D6REC4 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CFAP99D6REC4 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CFAP99D6REC4 AC138969.3-201ENST00000546612 1459 ntBASIC15.53■□□□□ 0.08
CFAP99D6REC4 AC138932.2-201ENST00000548268 1459 ntBASIC15.53■□□□□ 0.08
CFAP99D6REC4 AC126755.4-201ENST00000549796 1459 ntBASIC15.53■□□□□ 0.08
CFAP99D6REC4 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CFAP99D6REC4 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CFAP99D6REC4 DEK-201ENST00000244776 1441 ntTSL 2 BASIC15.53■□□□□ 0.08
CFAP99D6REC4 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CFAP99D6REC4 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC15.53■□□□□ 0.08
CFAP99D6REC4 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.53■□□□□ 0.08
CFAP99D6REC4 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CFAP99D6REC4 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CFAP99D6REC4 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
CFAP99D6REC4 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC15.53■□□□□ 0.08
CFAP99D6REC4 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
CFAP99D6REC4 MRPS18AP1-201ENST00000414458 589 ntBASIC15.53■□□□□ 0.08
CFAP99D6REC4 TOMM22P5-201ENST00000416399 439 ntBASIC15.53■□□□□ 0.08
CFAP99D6REC4 BCRP1-201ENST00000444246 691 ntBASIC15.53■□□□□ 0.08
CFAP99D6REC4 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CFAP99D6REC4 MEIS3P1-201ENST00000495167 958 ntBASIC15.53■□□□□ 0.08
CFAP99D6REC4 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC15.53■□□□□ 0.08
CFAP99D6REC4 SPCS2P1-201ENST00000561636 679 ntBASIC15.53■□□□□ 0.08
CFAP99D6REC4 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC15.53■□□□□ 0.08
CFAP99D6REC4 INO80C-206ENST00000586489 594 ntTSL 3 BASIC15.53■□□□□ 0.08
CFAP99D6REC4 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CFAP99D6REC4 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC15.53■□□□□ 0.08
CFAP99D6REC4 AC004840.1-201ENST00000636359 365 ntBASIC15.53■□□□□ 0.08
CFAP99D6REC4 AF228730.6-201ENST00000641497 218 ntBASIC15.53■□□□□ 0.08
CFAP99D6REC4 AC084121.3-201ENST00000641716 218 ntBASIC15.53■□□□□ 0.08
CFAP99D6REC4 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CFAP99D6REC4 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.53■□□□□ 0.08
CFAP99D6REC4 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.53■□□□□ 0.08
CFAP99D6REC4 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CFAP99D6REC4 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CFAP99D6REC4 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CFAP99D6REC4 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CFAP99D6REC4 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
CFAP99D6REC4 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.53■□□□□ 0.08
CFAP99D6REC4 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CFAP99D6REC4 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CFAP99D6REC4 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CFAP99D6REC4 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CFAP99D6REC4 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CFAP99D6REC4 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CFAP99D6REC4 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CFAP99D6REC4 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CFAP99D6REC4 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
CFAP99D6REC4 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.52■□□□□ 0.08
CFAP99D6REC4 AC087481.3-201ENST00000602886 1894 ntBASIC15.52■□□□□ 0.08
CFAP99D6REC4 AC020658.6-201ENST00000623564 1870 ntBASIC15.52■□□□□ 0.08
CFAP99D6REC4 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CFAP99D6REC4 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC15.52■□□□□ 0.08
CFAP99D6REC4 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CFAP99D6REC4 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms