Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
SRRM4A7MD48 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SRRM4A7MD48 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SRRM4A7MD48 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SRRM4A7MD48 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC12.5□□□□□ -0.41
SRRM4A7MD48 COCH-203ENST00000460581 2688 ntTSL 2 BASIC12.5□□□□□ -0.41
SRRM4A7MD48 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SRRM4A7MD48 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
SRRM4A7MD48 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
SRRM4A7MD48 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SRRM4A7MD48 BAD-202ENST00000394531 631 ntTSL 3 BASIC12.5□□□□□ -0.41
SRRM4A7MD48 TOMM22P5-201ENST00000416399 439 ntBASIC12.5□□□□□ -0.41
SRRM4A7MD48 AC107890.1-201ENST00000422478 521 ntBASIC12.5□□□□□ -0.41
SRRM4A7MD48 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC12.5□□□□□ -0.41
SRRM4A7MD48 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC12.5□□□□□ -0.41
SRRM4A7MD48 AC097493.3-201ENST00000509725 367 ntBASIC12.5□□□□□ -0.41
SRRM4A7MD48 BAD-207ENST00000544785 525 ntTSL 3 BASIC12.5□□□□□ -0.41
SRRM4A7MD48 MPI-209ENST00000564003 1195 ntTSL 2 BASIC12.5□□□□□ -0.41
SRRM4A7MD48 AC140878.1-201ENST00000565277 250 ntBASIC12.5□□□□□ -0.41
SRRM4A7MD48 UBL5-208ENST00000593087 320 ntTSL 3 BASIC12.5□□□□□ -0.41
SRRM4A7MD48 AC074044.1-201ENST00000609673 707 ntBASIC12.5□□□□□ -0.41
SRRM4A7MD48 AC093028.1-201ENST00000622998 982 ntBASIC12.5□□□□□ -0.41
SRRM4A7MD48 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC12.5□□□□□ -0.41
SRRM4A7MD48 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SRRM4A7MD48 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SRRM4A7MD48 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC12.5□□□□□ -0.41
SRRM4A7MD48 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SRRM4A7MD48 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC12.5□□□□□ -0.41
SRRM4A7MD48 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC12.5□□□□□ -0.41
SRRM4A7MD48 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SRRM4A7MD48 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
SRRM4A7MD48 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC12.5□□□□□ -0.41
SRRM4A7MD48 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SRRM4A7MD48 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
SRRM4A7MD48 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SRRM4A7MD48 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SRRM4A7MD48 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SRRM4A7MD48 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC12.5□□□□□ -0.41
SRRM4A7MD48 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SRRM4A7MD48 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SRRM4A7MD48 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
SRRM4A7MD48 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SRRM4A7MD48 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC12.5□□□□□ -0.41
SRRM4A7MD48 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
SRRM4A7MD48 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
SRRM4A7MD48 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SRRM4A7MD48 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SRRM4A7MD48 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SRRM4A7MD48 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SRRM4A7MD48 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SRRM4A7MD48 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC12.49□□□□□ -0.41
SRRM4A7MD48 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SRRM4A7MD48 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SRRM4A7MD48 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC12.49□□□□□ -0.41
SRRM4A7MD48 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC12.49□□□□□ -0.41
SRRM4A7MD48 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC12.49□□□□□ -0.41
SRRM4A7MD48 LINC01101-201ENST00000622953 1884 ntBASIC12.49□□□□□ -0.41
SRRM4A7MD48 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
SRRM4A7MD48 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
SRRM4A7MD48 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
SRRM4A7MD48 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SRRM4A7MD48 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
SRRM4A7MD48 TP73-209ENST00000603362 1668 ntTSL 5 BASIC12.49□□□□□ -0.41
SRRM4A7MD48 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SRRM4A7MD48 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SRRM4A7MD48 WASH3P-207ENST00000560956 1394 ntBASIC12.49□□□□□ -0.41
SRRM4A7MD48 AC087499.5-201ENST00000452760 1342 ntBASIC12.49□□□□□ -0.41
SRRM4A7MD48 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SRRM4A7MD48 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SRRM4A7MD48 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SRRM4A7MD48 AL133267.1-201ENST00000398220 340 ntBASIC12.49□□□□□ -0.41
SRRM4A7MD48 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC12.49□□□□□ -0.41
SRRM4A7MD48 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC12.49□□□□□ -0.41
SRRM4A7MD48 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC12.49□□□□□ -0.41
SRRM4A7MD48 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC12.49□□□□□ -0.41
SRRM4A7MD48 SDHAP3-202ENST00000515467 728 ntBASIC12.49□□□□□ -0.41
SRRM4A7MD48 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC12.49□□□□□ -0.41
SRRM4A7MD48 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
SRRM4A7MD48 AC044860.1-202ENST00000559481 777 ntBASIC12.49□□□□□ -0.41
SRRM4A7MD48 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC12.49□□□□□ -0.41
SRRM4A7MD48 TBCB-211ENST00000589996 724 ntTSL 3 BASIC12.49□□□□□ -0.41
SRRM4A7MD48 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC12.49□□□□□ -0.41
SRRM4A7MD48 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC12.49□□□□□ -0.41
SRRM4A7MD48 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
SRRM4A7MD48 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SRRM4A7MD48 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SRRM4A7MD48 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
SRRM4A7MD48 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SRRM4A7MD48 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SRRM4A7MD48 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SRRM4A7MD48 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SRRM4A7MD48 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SRRM4A7MD48 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
SRRM4A7MD48 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
SRRM4A7MD48 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
SRRM4A7MD48 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SRRM4A7MD48 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SRRM4A7MD48 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SRRM4A7MD48 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SRRM4A7MD48 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms