Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC15.39■□□□□ 0.05
TBC1D3FA6NER0 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TBC1D3FA6NER0 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC15.39■□□□□ 0.05
TBC1D3FA6NER0 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TBC1D3FA6NER0 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.39■□□□□ 0.05
TBC1D3FA6NER0 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.39■□□□□ 0.05
TBC1D3FA6NER0 AC067930.6-201ENST00000623257 4947 ntBASIC15.39■□□□□ 0.05
TBC1D3FA6NER0 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TBC1D3FA6NER0 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.39■□□□□ 0.05
TBC1D3FA6NER0 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TBC1D3FA6NER0 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TBC1D3FA6NER0 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TBC1D3FA6NER0 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.39■□□□□ 0.05
TBC1D3FA6NER0 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TBC1D3FA6NER0 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.38■□□□□ 0.05
TBC1D3FA6NER0 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC15.38■□□□□ 0.05
TBC1D3FA6NER0 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.38■□□□□ 0.05
TBC1D3FA6NER0 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC15.38■□□□□ 0.05
TBC1D3FA6NER0 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
TBC1D3FA6NER0 AC022188.1-201ENST00000620960 1664 ntBASIC15.38■□□□□ 0.05
TBC1D3FA6NER0 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.38■□□□□ 0.05
TBC1D3FA6NER0 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
TBC1D3FA6NER0 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TBC1D3FA6NER0 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TBC1D3FA6NER0 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TBC1D3FA6NER0 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TBC1D3FA6NER0 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
TBC1D3FA6NER0 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TBC1D3FA6NER0 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TBC1D3FA6NER0 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
TBC1D3FA6NER0 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TBC1D3FA6NER0 GUK1-206ENST00000366723 845 ntTSL 5 BASIC15.38■□□□□ 0.05
TBC1D3FA6NER0 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
TBC1D3FA6NER0 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC15.38■□□□□ 0.05
TBC1D3FA6NER0 KLF2P2-201ENST00000416807 1039 ntBASIC15.38■□□□□ 0.05
TBC1D3FA6NER0 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC15.38■□□□□ 0.05
TBC1D3FA6NER0 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC15.38■□□□□ 0.05
TBC1D3FA6NER0 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC15.38■□□□□ 0.05
TBC1D3FA6NER0 FAM197Y7-201ENST00000432892 766 ntBASIC15.38■□□□□ 0.05
TBC1D3FA6NER0 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TBC1D3FA6NER0 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
TBC1D3FA6NER0 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TBC1D3FA6NER0 AC004066.1-201ENST00000502488 802 ntBASIC15.38■□□□□ 0.05
TBC1D3FA6NER0 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
TBC1D3FA6NER0 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC15.38■□□□□ 0.05
TBC1D3FA6NER0 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC15.38■□□□□ 0.05
TBC1D3FA6NER0 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC15.38■□□□□ 0.05
TBC1D3FA6NER0 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC15.38■□□□□ 0.05
TBC1D3FA6NER0 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC15.38■□□□□ 0.05
TBC1D3FA6NER0 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
TBC1D3FA6NER0 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TBC1D3FA6NER0 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TBC1D3FA6NER0 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TBC1D3FA6NER0 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
TBC1D3FA6NER0 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TBC1D3FA6NER0 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
TBC1D3FA6NER0 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TBC1D3FA6NER0 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TBC1D3FA6NER0 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TBC1D3FA6NER0 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC15.38■□□□□ 0.05
TBC1D3FA6NER0 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.38■□□□□ 0.05
TBC1D3FA6NER0 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TBC1D3FA6NER0 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TBC1D3FA6NER0 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC15.37■□□□□ 0.05
TBC1D3FA6NER0 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC15.37■□□□□ 0.05
TBC1D3FA6NER0 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TBC1D3FA6NER0 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
TBC1D3FA6NER0 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC15.37■□□□□ 0.05
TBC1D3FA6NER0 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC15.37■□□□□ 0.05
TBC1D3FA6NER0 AC084364.1-201ENST00000551967 1556 ntBASIC15.37■□□□□ 0.05
TBC1D3FA6NER0 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TBC1D3FA6NER0 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.37■□□□□ 0.05
TBC1D3FA6NER0 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TBC1D3FA6NER0 FOS-202ENST00000535987 1402 ntTSL 2 BASIC15.37■□□□□ 0.05
TBC1D3FA6NER0 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
TBC1D3FA6NER0 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
TBC1D3FA6NER0 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
TBC1D3FA6NER0 RNU1-114P-201ENST00000365297 166 ntBASIC15.37■□□□□ 0.05
TBC1D3FA6NER0 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC15.37■□□□□ 0.05
TBC1D3FA6NER0 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TBC1D3FA6NER0 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TBC1D3FA6NER0 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
TBC1D3FA6NER0 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC15.37■□□□□ 0.05
TBC1D3FA6NER0 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC15.37■□□□□ 0.05
TBC1D3FA6NER0 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TBC1D3FA6NER0 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC15.37■□□□□ 0.05
TBC1D3FA6NER0 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TBC1D3FA6NER0 USB1-203ENST00000539737 1212 ntTSL 2 BASIC15.37■□□□□ 0.05
TBC1D3FA6NER0 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TBC1D3FA6NER0 AC078819.1-201ENST00000547454 765 ntBASIC15.37■□□□□ 0.05
TBC1D3FA6NER0 AC012085.1-201ENST00000548270 765 ntBASIC15.37■□□□□ 0.05
TBC1D3FA6NER0 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC15.37■□□□□ 0.05
TBC1D3FA6NER0 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC15.37■□□□□ 0.05
TBC1D3FA6NER0 AC138951.2-201ENST00000623455 1161 ntBASIC15.37■□□□□ 0.05
TBC1D3FA6NER0 AC008687.7-202ENST00000637404 953 ntBASIC15.37■□□□□ 0.05
TBC1D3FA6NER0 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.37■□□□□ 0.05
TBC1D3FA6NER0 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
TBC1D3FA6NER0 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
TBC1D3FA6NER0 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TBC1D3FA6NER0 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms