Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
SBNO1A3KN83 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC20.61■□□□□ 0.89
SBNO1A3KN83 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
SBNO1A3KN83 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SBNO1A3KN83 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC20.61■□□□□ 0.89
SBNO1A3KN83 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SBNO1A3KN83 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC20.6■□□□□ 0.89
SBNO1A3KN83 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SBNO1A3KN83 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC20.6■□□□□ 0.89
SBNO1A3KN83 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SBNO1A3KN83 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
SBNO1A3KN83 VDAC1P1-201ENST00000439229 848 ntBASIC20.6■□□□□ 0.89
SBNO1A3KN83 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SBNO1A3KN83 RPL18P13-201ENST00000478088 569 ntBASIC20.6■□□□□ 0.89
SBNO1A3KN83 HLA-J-204ENST00000495278 958 ntBASIC20.6■□□□□ 0.89
SBNO1A3KN83 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC20.6■□□□□ 0.89
SBNO1A3KN83 CDC23-208ENST00000505120 455 ntTSL 3 BASIC20.6■□□□□ 0.89
SBNO1A3KN83 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC20.6■□□□□ 0.89
SBNO1A3KN83 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SBNO1A3KN83 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC20.6■□□□□ 0.89
SBNO1A3KN83 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SBNO1A3KN83 YRDCP1-201ENST00000621419 643 ntBASIC20.6■□□□□ 0.89
SBNO1A3KN83 AC002472.3-201ENST00000640124 621 ntBASIC20.6■□□□□ 0.89
SBNO1A3KN83 HLA-C-210ENST00000640219 976 ntBASIC20.6■□□□□ 0.89
SBNO1A3KN83 SHC1P1-201ENST00000425230 1745 ntBASIC20.6■□□□□ 0.89
SBNO1A3KN83 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
SBNO1A3KN83 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SBNO1A3KN83 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SBNO1A3KN83 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SBNO1A3KN83 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC20.6■□□□□ 0.89
SBNO1A3KN83 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
SBNO1A3KN83 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SBNO1A3KN83 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SBNO1A3KN83 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
SBNO1A3KN83 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
SBNO1A3KN83 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC20.6■□□□□ 0.89
SBNO1A3KN83 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SBNO1A3KN83 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SBNO1A3KN83 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SBNO1A3KN83 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SBNO1A3KN83 HNRNPA1P41-201ENST00000397777 928 ntBASIC20.59■□□□□ 0.89
SBNO1A3KN83 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC20.59■□□□□ 0.89
SBNO1A3KN83 FAM58BP-201ENST00000439056 645 ntBASIC20.59■□□□□ 0.89
SBNO1A3KN83 AC073150.1-201ENST00000450406 1084 ntBASIC20.59■□□□□ 0.89
SBNO1A3KN83 AC026434.2-201ENST00000506094 1078 ntBASIC20.59■□□□□ 0.89
SBNO1A3KN83 AC090857.1-201ENST00000527400 390 ntBASIC20.59■□□□□ 0.89
SBNO1A3KN83 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SBNO1A3KN83 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC20.59■□□□□ 0.89
SBNO1A3KN83 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
SBNO1A3KN83 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SBNO1A3KN83 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC20.59■□□□□ 0.89
SBNO1A3KN83 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SBNO1A3KN83 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SBNO1A3KN83 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
SBNO1A3KN83 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SBNO1A3KN83 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SBNO1A3KN83 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
SBNO1A3KN83 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
SBNO1A3KN83 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SBNO1A3KN83 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
SBNO1A3KN83 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC20.59■□□□□ 0.89
SBNO1A3KN83 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
SBNO1A3KN83 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC20.59■□□□□ 0.89
SBNO1A3KN83 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC20.59■□□□□ 0.89
SBNO1A3KN83 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SBNO1A3KN83 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SBNO1A3KN83 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC20.59■□□□□ 0.89
SBNO1A3KN83 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC20.59■□□□□ 0.89
SBNO1A3KN83 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
SBNO1A3KN83 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC20.59■□□□□ 0.89
SBNO1A3KN83 IGLV3-15-201ENST00000518356 244 ntBASIC20.59■□□□□ 0.89
SBNO1A3KN83 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC20.59■□□□□ 0.89
SBNO1A3KN83 CFL1-206ENST00000527344 962 ntTSL 2 BASIC20.59■□□□□ 0.89
SBNO1A3KN83 DUX4L46-201ENST00000566845 751 ntBASIC20.59■□□□□ 0.89
SBNO1A3KN83 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC20.59■□□□□ 0.89
SBNO1A3KN83 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC20.59■□□□□ 0.89
SBNO1A3KN83 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SBNO1A3KN83 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
SBNO1A3KN83 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC20.58■□□□□ 0.89
SBNO1A3KN83 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SBNO1A3KN83 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
SBNO1A3KN83 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SBNO1A3KN83 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SBNO1A3KN83 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC20.58■□□□□ 0.89
SBNO1A3KN83 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC20.58■□□□□ 0.89
SBNO1A3KN83 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SBNO1A3KN83 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC20.58■□□□□ 0.89
SBNO1A3KN83 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SBNO1A3KN83 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SBNO1A3KN83 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SBNO1A3KN83 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC20.58■□□□□ 0.89
SBNO1A3KN83 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC20.58■□□□□ 0.89
SBNO1A3KN83 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
SBNO1A3KN83 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
SBNO1A3KN83 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SBNO1A3KN83 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SBNO1A3KN83 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SBNO1A3KN83 AL627389.1-201ENST00000413508 1182 ntBASIC20.58■□□□□ 0.88
SBNO1A3KN83 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC20.58■□□□□ 0.88
SBNO1A3KN83 PAM16-211ENST00000575848 518 ntTSL 3 BASIC20.58■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms