Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 AC100827.2-201ENST00000563214 1194 ntBASIC17.26■□□□□ 0.35
PTCH2Q9Y6C5 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC17.26■□□□□ 0.35
PTCH2Q9Y6C5 AC103810.10-201ENST00000606504 343 ntBASIC17.26■□□□□ 0.35
PTCH2Q9Y6C5 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC17.26■□□□□ 0.35
PTCH2Q9Y6C5 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
PTCH2Q9Y6C5 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
PTCH2Q9Y6C5 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTCH2Q9Y6C5 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
PTCH2Q9Y6C5 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
PTCH2Q9Y6C5 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
PTCH2Q9Y6C5 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTCH2Q9Y6C5 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.26■□□□□ 0.35
PTCH2Q9Y6C5 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTCH2Q9Y6C5 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PTCH2Q9Y6C5 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTCH2Q9Y6C5 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
PTCH2Q9Y6C5 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PTCH2Q9Y6C5 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PTCH2Q9Y6C5 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.25■□□□□ 0.35
PTCH2Q9Y6C5 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
PTCH2Q9Y6C5 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17.25■□□□□ 0.35
PTCH2Q9Y6C5 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
PTCH2Q9Y6C5 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
PTCH2Q9Y6C5 AC074138.1-201ENST00000611182 1303 ntBASIC17.25■□□□□ 0.35
PTCH2Q9Y6C5 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTCH2Q9Y6C5 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTCH2Q9Y6C5 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.25■□□□□ 0.35
PTCH2Q9Y6C5 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.25■□□□□ 0.35
PTCH2Q9Y6C5 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTCH2Q9Y6C5 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC17.25■□□□□ 0.35
PTCH2Q9Y6C5 RPL7P35-201ENST00000446943 740 ntBASIC17.25■□□□□ 0.35
PTCH2Q9Y6C5 AC004066.1-201ENST00000502488 802 ntBASIC17.25■□□□□ 0.35
PTCH2Q9Y6C5 RCC2P8-201ENST00000502779 1035 ntBASIC17.25■□□□□ 0.35
PTCH2Q9Y6C5 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC17.25■□□□□ 0.35
PTCH2Q9Y6C5 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC17.25■□□□□ 0.35
PTCH2Q9Y6C5 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC17.25■□□□□ 0.35
PTCH2Q9Y6C5 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC17.25■□□□□ 0.35
PTCH2Q9Y6C5 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC17.25■□□□□ 0.35
PTCH2Q9Y6C5 SNORD3B-2-202ENST00000571722 791 ntBASIC17.25■□□□□ 0.35
PTCH2Q9Y6C5 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC17.25■□□□□ 0.35
PTCH2Q9Y6C5 MIR4313-201ENST00000580760 101 ntBASIC17.25■□□□□ 0.35
PTCH2Q9Y6C5 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC17.25■□□□□ 0.35
PTCH2Q9Y6C5 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC17.25■□□□□ 0.35
PTCH2Q9Y6C5 AC242376.2-201ENST00000619355 883 ntBASIC17.25■□□□□ 0.35
PTCH2Q9Y6C5 AC138466.3-201ENST00000619983 221 ntBASIC17.25■□□□□ 0.35
PTCH2Q9Y6C5 AC007718.1-201ENST00000621078 280 ntBASIC17.25■□□□□ 0.35
PTCH2Q9Y6C5 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTCH2Q9Y6C5 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
PTCH2Q9Y6C5 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.25■□□□□ 0.35
PTCH2Q9Y6C5 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTCH2Q9Y6C5 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTCH2Q9Y6C5 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTCH2Q9Y6C5 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
PTCH2Q9Y6C5 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTCH2Q9Y6C5 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTCH2Q9Y6C5 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
PTCH2Q9Y6C5 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC17.25■□□□□ 0.35
PTCH2Q9Y6C5 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC17.25■□□□□ 0.35
PTCH2Q9Y6C5 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
PTCH2Q9Y6C5 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
PTCH2Q9Y6C5 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTCH2Q9Y6C5 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTCH2Q9Y6C5 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
PTCH2Q9Y6C5 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
PTCH2Q9Y6C5 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
PTCH2Q9Y6C5 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTCH2Q9Y6C5 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTCH2Q9Y6C5 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.24■□□□□ 0.35
PTCH2Q9Y6C5 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTCH2Q9Y6C5 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTCH2Q9Y6C5 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
PTCH2Q9Y6C5 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTCH2Q9Y6C5 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTCH2Q9Y6C5 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PTCH2Q9Y6C5 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PTCH2Q9Y6C5 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTCH2Q9Y6C5 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTCH2Q9Y6C5 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PTCH2Q9Y6C5 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.24■□□□□ 0.35
PTCH2Q9Y6C5 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PTCH2Q9Y6C5 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC17.24■□□□□ 0.35
PTCH2Q9Y6C5 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
PTCH2Q9Y6C5 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC17.24■□□□□ 0.35
PTCH2Q9Y6C5 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC17.24■□□□□ 0.35
PTCH2Q9Y6C5 AC022616.1-201ENST00000518688 554 ntBASIC17.24■□□□□ 0.35
PTCH2Q9Y6C5 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC17.24■□□□□ 0.35
PTCH2Q9Y6C5 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC17.24■□□□□ 0.35
PTCH2Q9Y6C5 MIR4683-201ENST00000579659 81 ntBASIC17.24■□□□□ 0.35
PTCH2Q9Y6C5 NAT9-211ENST00000580632 799 ntTSL 3 BASIC17.24■□□□□ 0.35
PTCH2Q9Y6C5 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC17.24■□□□□ 0.35
PTCH2Q9Y6C5 AC127024.7-201ENST00000625101 200 ntBASIC17.24■□□□□ 0.35
PTCH2Q9Y6C5 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC17.24■□□□□ 0.35
PTCH2Q9Y6C5 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
PTCH2Q9Y6C5 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTCH2Q9Y6C5 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.24■□□□□ 0.35
PTCH2Q9Y6C5 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC17.24■□□□□ 0.35
PTCH2Q9Y6C5 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC17.24■□□□□ 0.35
PTCH2Q9Y6C5 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PTCH2Q9Y6C5 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PTCH2Q9Y6C5 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms