Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRCH1Q9Y2L9 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRCH1Q9Y2L9 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRCH1Q9Y2L9 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
LRCH1Q9Y2L9 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRCH1Q9Y2L9 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LRCH1Q9Y2L9 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC14.83□□□□□ -0.04
LRCH1Q9Y2L9 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRCH1Q9Y2L9 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRCH1Q9Y2L9 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC14.82□□□□□ -0.04
LRCH1Q9Y2L9 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
LRCH1Q9Y2L9 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRCH1Q9Y2L9 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRCH1Q9Y2L9 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC14.82□□□□□ -0.04
LRCH1Q9Y2L9 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
LRCH1Q9Y2L9 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRCH1Q9Y2L9 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRCH1Q9Y2L9 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRCH1Q9Y2L9 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.82□□□□□ -0.04
LRCH1Q9Y2L9 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.82□□□□□ -0.04
LRCH1Q9Y2L9 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRCH1Q9Y2L9 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LRCH1Q9Y2L9 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LRCH1Q9Y2L9 EMD-201ENST00000369835 966 ntTSL 3 BASIC14.82□□□□□ -0.04
LRCH1Q9Y2L9 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
LRCH1Q9Y2L9 CTNS-203ENST00000399306 803 ntTSL 3 BASIC14.82□□□□□ -0.04
LRCH1Q9Y2L9 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC14.82□□□□□ -0.04
LRCH1Q9Y2L9 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC14.82□□□□□ -0.04
LRCH1Q9Y2L9 EMBP1-201ENST00000458200 901 ntBASIC14.82□□□□□ -0.04
LRCH1Q9Y2L9 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC14.82□□□□□ -0.04
LRCH1Q9Y2L9 AL160237.2-201ENST00000556165 472 ntBASIC14.82□□□□□ -0.04
LRCH1Q9Y2L9 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC14.82□□□□□ -0.04
LRCH1Q9Y2L9 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC14.82□□□□□ -0.04
LRCH1Q9Y2L9 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC14.82□□□□□ -0.04
LRCH1Q9Y2L9 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRCH1Q9Y2L9 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRCH1Q9Y2L9 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.82□□□□□ -0.04
LRCH1Q9Y2L9 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
LRCH1Q9Y2L9 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
LRCH1Q9Y2L9 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRCH1Q9Y2L9 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
LRCH1Q9Y2L9 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRCH1Q9Y2L9 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC14.82□□□□□ -0.04
LRCH1Q9Y2L9 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC14.82□□□□□ -0.04
LRCH1Q9Y2L9 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRCH1Q9Y2L9 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC14.82□□□□□ -0.04
LRCH1Q9Y2L9 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC14.82□□□□□ -0.04
LRCH1Q9Y2L9 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LRCH1Q9Y2L9 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRCH1Q9Y2L9 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC14.82□□□□□ -0.04
LRCH1Q9Y2L9 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRCH1Q9Y2L9 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRCH1Q9Y2L9 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.81□□□□□ -0.04
LRCH1Q9Y2L9 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRCH1Q9Y2L9 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
LRCH1Q9Y2L9 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRCH1Q9Y2L9 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LRCH1Q9Y2L9 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LRCH1Q9Y2L9 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.81□□□□□ -0.04
LRCH1Q9Y2L9 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
LRCH1Q9Y2L9 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LRCH1Q9Y2L9 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.81□□□□□ -0.04
LRCH1Q9Y2L9 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.81□□□□□ -0.04
LRCH1Q9Y2L9 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC14.81□□□□□ -0.04
LRCH1Q9Y2L9 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRCH1Q9Y2L9 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRCH1Q9Y2L9 LSM5-204ENST00000409909 740 ntTSL 2 BASIC14.81□□□□□ -0.04
LRCH1Q9Y2L9 CDK2AP2P3-201ENST00000422476 372 ntBASIC14.81□□□□□ -0.04
LRCH1Q9Y2L9 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC14.81□□□□□ -0.04
LRCH1Q9Y2L9 PMS2P1-201ENST00000431037 1228 ntBASIC14.81□□□□□ -0.04
LRCH1Q9Y2L9 S100A2-206ENST00000497140 697 ntTSL 2 BASIC14.81□□□□□ -0.04
LRCH1Q9Y2L9 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC14.81□□□□□ -0.04
LRCH1Q9Y2L9 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC14.81□□□□□ -0.04
LRCH1Q9Y2L9 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC14.81□□□□□ -0.04
LRCH1Q9Y2L9 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC14.81□□□□□ -0.04
LRCH1Q9Y2L9 GZMM-202ENST00000592501 941 ntTSL 3 BASIC14.81□□□□□ -0.04
LRCH1Q9Y2L9 REXO1L3P-201ENST00000622202 1288 ntBASIC14.81□□□□□ -0.04
LRCH1Q9Y2L9 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LRCH1Q9Y2L9 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRCH1Q9Y2L9 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
LRCH1Q9Y2L9 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC14.81□□□□□ -0.04
LRCH1Q9Y2L9 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC14.81□□□□□ -0.04
LRCH1Q9Y2L9 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRCH1Q9Y2L9 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRCH1Q9Y2L9 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRCH1Q9Y2L9 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
LRCH1Q9Y2L9 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC14.81□□□□□ -0.04
LRCH1Q9Y2L9 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRCH1Q9Y2L9 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.81□□□□□ -0.04
LRCH1Q9Y2L9 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
LRCH1Q9Y2L9 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRCH1Q9Y2L9 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LRCH1Q9Y2L9 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
LRCH1Q9Y2L9 AC015818.8-201ENST00000587907 1519 ntBASIC14.81□□□□□ -0.04
LRCH1Q9Y2L9 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC14.81□□□□□ -0.04
LRCH1Q9Y2L9 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
LRCH1Q9Y2L9 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC14.81□□□□□ -0.04
LRCH1Q9Y2L9 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LRCH1Q9Y2L9 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRCH1Q9Y2L9 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms