Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC16.72■□□□□ 0.27
SSX2IPQ9Y2D8 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC16.72■□□□□ 0.27
SSX2IPQ9Y2D8 AC093813.1-201ENST00000605066 256 ntBASIC16.72■□□□□ 0.27
SSX2IPQ9Y2D8 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC16.72■□□□□ 0.27
SSX2IPQ9Y2D8 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC16.72■□□□□ 0.27
SSX2IPQ9Y2D8 WNT11-204ENST00000621122 789 ntTSL 5 BASIC16.72■□□□□ 0.27
SSX2IPQ9Y2D8 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.72■□□□□ 0.27
SSX2IPQ9Y2D8 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SSX2IPQ9Y2D8 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SSX2IPQ9Y2D8 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
SSX2IPQ9Y2D8 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SSX2IPQ9Y2D8 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.72■□□□□ 0.27
SSX2IPQ9Y2D8 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.72■□□□□ 0.27
SSX2IPQ9Y2D8 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC16.72■□□□□ 0.27
SSX2IPQ9Y2D8 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SSX2IPQ9Y2D8 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SSX2IPQ9Y2D8 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
SSX2IPQ9Y2D8 AC134312.5-201ENST00000568031 1313 ntBASIC16.71■□□□□ 0.27
SSX2IPQ9Y2D8 AC093525.8-201ENST00000624099 1342 ntBASIC16.71■□□□□ 0.27
SSX2IPQ9Y2D8 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SSX2IPQ9Y2D8 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SSX2IPQ9Y2D8 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
SSX2IPQ9Y2D8 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.71■□□□□ 0.27
SSX2IPQ9Y2D8 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SSX2IPQ9Y2D8 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC16.71■□□□□ 0.27
SSX2IPQ9Y2D8 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.71■□□□□ 0.27
SSX2IPQ9Y2D8 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SSX2IPQ9Y2D8 AC092364.2-201ENST00000596710 2692 ntBASIC16.71■□□□□ 0.27
SSX2IPQ9Y2D8 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SSX2IPQ9Y2D8 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
SSX2IPQ9Y2D8 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
SSX2IPQ9Y2D8 ZBTB12BP-201ENST00000314232 1122 ntBASIC16.71■□□□□ 0.27
SSX2IPQ9Y2D8 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SSX2IPQ9Y2D8 FAM86MP-201ENST00000340703 885 ntBASIC16.71■□□□□ 0.27
SSX2IPQ9Y2D8 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SSX2IPQ9Y2D8 ACTBP11-201ENST00000436287 1126 ntBASIC16.71■□□□□ 0.27
SSX2IPQ9Y2D8 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC16.71■□□□□ 0.27
SSX2IPQ9Y2D8 AC012441.1-201ENST00000446669 685 ntBASIC16.71■□□□□ 0.27
SSX2IPQ9Y2D8 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC16.71■□□□□ 0.27
SSX2IPQ9Y2D8 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC16.71■□□□□ 0.27
SSX2IPQ9Y2D8 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC16.71■□□□□ 0.27
SSX2IPQ9Y2D8 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
SSX2IPQ9Y2D8 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC16.71■□□□□ 0.27
SSX2IPQ9Y2D8 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC16.71■□□□□ 0.27
SSX2IPQ9Y2D8 MIR4525-201ENST00000580000 75 ntBASIC16.71■□□□□ 0.27
SSX2IPQ9Y2D8 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
SSX2IPQ9Y2D8 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SSX2IPQ9Y2D8 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.71■□□□□ 0.27
SSX2IPQ9Y2D8 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
SSX2IPQ9Y2D8 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.71■□□□□ 0.27
SSX2IPQ9Y2D8 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SSX2IPQ9Y2D8 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
SSX2IPQ9Y2D8 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.71■□□□□ 0.27
SSX2IPQ9Y2D8 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SSX2IPQ9Y2D8 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
SSX2IPQ9Y2D8 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
SSX2IPQ9Y2D8 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
SSX2IPQ9Y2D8 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SSX2IPQ9Y2D8 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SSX2IPQ9Y2D8 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.7■□□□□ 0.26
SSX2IPQ9Y2D8 AL121723.1-201ENST00000445194 1519 ntBASIC16.7■□□□□ 0.26
SSX2IPQ9Y2D8 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.7■□□□□ 0.26
SSX2IPQ9Y2D8 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SSX2IPQ9Y2D8 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SSX2IPQ9Y2D8 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SSX2IPQ9Y2D8 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
SSX2IPQ9Y2D8 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SSX2IPQ9Y2D8 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SSX2IPQ9Y2D8 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SSX2IPQ9Y2D8 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SSX2IPQ9Y2D8 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
SSX2IPQ9Y2D8 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SSX2IPQ9Y2D8 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SSX2IPQ9Y2D8 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SSX2IPQ9Y2D8 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SSX2IPQ9Y2D8 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.7■□□□□ 0.26
SSX2IPQ9Y2D8 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC16.7■□□□□ 0.26
SSX2IPQ9Y2D8 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SSX2IPQ9Y2D8 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.7■□□□□ 0.26
SSX2IPQ9Y2D8 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SSX2IPQ9Y2D8 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SSX2IPQ9Y2D8 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC16.7■□□□□ 0.26
SSX2IPQ9Y2D8 AL133267.1-201ENST00000398220 340 ntBASIC16.7■□□□□ 0.26
SSX2IPQ9Y2D8 SUN1-204ENST00000403868 978 ntTSL 2 BASIC16.7■□□□□ 0.26
SSX2IPQ9Y2D8 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
SSX2IPQ9Y2D8 USB1-202ENST00000423271 1217 ntTSL 2 BASIC16.7■□□□□ 0.26
SSX2IPQ9Y2D8 AL355994.2-201ENST00000447882 704 ntBASIC16.7■□□□□ 0.26
SSX2IPQ9Y2D8 CSF2RBP1-201ENST00000447905 391 ntBASIC16.7■□□□□ 0.26
SSX2IPQ9Y2D8 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC16.7■□□□□ 0.26
SSX2IPQ9Y2D8 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SSX2IPQ9Y2D8 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC16.7■□□□□ 0.26
SSX2IPQ9Y2D8 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC16.7■□□□□ 0.26
SSX2IPQ9Y2D8 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SSX2IPQ9Y2D8 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC16.7■□□□□ 0.26
SSX2IPQ9Y2D8 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC16.7■□□□□ 0.26
SSX2IPQ9Y2D8 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
SSX2IPQ9Y2D8 NOP2-211ENST00000540228 668 ntTSL 2 BASIC16.7■□□□□ 0.26
SSX2IPQ9Y2D8 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SSX2IPQ9Y2D8 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC16.7■□□□□ 0.26
SSX2IPQ9Y2D8 CLUHP6-201ENST00000580789 941 ntBASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 132.9 ms