Protein–RNA interactions for Protein: Q9Y259

CHKB, Choline/ethanolamine kinase, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKBQ9Y259 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CHKBQ9Y259 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CHKBQ9Y259 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
CHKBQ9Y259 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CHKBQ9Y259 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
CHKBQ9Y259 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC15.99■□□□□ 0.15
CHKBQ9Y259 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CHKBQ9Y259 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CHKBQ9Y259 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
CHKBQ9Y259 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CHKBQ9Y259 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
CHKBQ9Y259 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
CHKBQ9Y259 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CHKBQ9Y259 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CHKBQ9Y259 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CHKBQ9Y259 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
CHKBQ9Y259 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC15.98■□□□□ 0.15
CHKBQ9Y259 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC15.98■□□□□ 0.15
CHKBQ9Y259 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CHKBQ9Y259 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CHKBQ9Y259 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CHKBQ9Y259 TKT-202ENST00000423516 2075 ntTSL 2 BASIC15.98■□□□□ 0.15
CHKBQ9Y259 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.98■□□□□ 0.15
CHKBQ9Y259 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.98■□□□□ 0.15
CHKBQ9Y259 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
CHKBQ9Y259 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CHKBQ9Y259 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
CHKBQ9Y259 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CHKBQ9Y259 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC15.98■□□□□ 0.15
CHKBQ9Y259 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CHKBQ9Y259 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CHKBQ9Y259 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CHKBQ9Y259 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CHKBQ9Y259 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC15.98■□□□□ 0.15
CHKBQ9Y259 AC009477.1-201ENST00000452936 217 ntBASIC15.98■□□□□ 0.15
CHKBQ9Y259 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC15.98■□□□□ 0.15
CHKBQ9Y259 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC15.98■□□□□ 0.15
CHKBQ9Y259 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.98■□□□□ 0.15
CHKBQ9Y259 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC15.98■□□□□ 0.15
CHKBQ9Y259 AQP6-203ENST00000551733 849 ntTSL 3 BASIC15.98■□□□□ 0.15
CHKBQ9Y259 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC15.98■□□□□ 0.15
CHKBQ9Y259 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC15.98■□□□□ 0.15
CHKBQ9Y259 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC15.98■□□□□ 0.15
CHKBQ9Y259 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC15.98■□□□□ 0.15
CHKBQ9Y259 SSH2-210ENST00000582084 560 ntTSL 3 BASIC15.98■□□□□ 0.15
CHKBQ9Y259 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
CHKBQ9Y259 AL355385.1-201ENST00000606123 409 ntBASIC15.98■□□□□ 0.15
CHKBQ9Y259 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CHKBQ9Y259 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
CHKBQ9Y259 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
CHKBQ9Y259 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CHKBQ9Y259 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CHKBQ9Y259 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CHKBQ9Y259 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CHKBQ9Y259 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CHKBQ9Y259 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CHKBQ9Y259 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
CHKBQ9Y259 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
CHKBQ9Y259 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CHKBQ9Y259 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CHKBQ9Y259 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHKBQ9Y259 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CHKBQ9Y259 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CHKBQ9Y259 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
CHKBQ9Y259 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.97■□□□□ 0.15
CHKBQ9Y259 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CHKBQ9Y259 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHKBQ9Y259 AC013726.1-201ENST00000563747 2285 ntBASIC15.97■□□□□ 0.15
CHKBQ9Y259 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC15.97■□□□□ 0.15
CHKBQ9Y259 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC15.97■□□□□ 0.15
CHKBQ9Y259 AC022144.1-201ENST00000602255 1580 ntBASIC15.97■□□□□ 0.15
CHKBQ9Y259 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC15.97■□□□□ 0.15
CHKBQ9Y259 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHKBQ9Y259 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
CHKBQ9Y259 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
CHKBQ9Y259 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CHKBQ9Y259 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CHKBQ9Y259 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.97■□□□□ 0.15
CHKBQ9Y259 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CHKBQ9Y259 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CHKBQ9Y259 AC074338.1-201ENST00000416825 156 ntBASIC15.97■□□□□ 0.15
CHKBQ9Y259 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC15.97■□□□□ 0.15
CHKBQ9Y259 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC15.97■□□□□ 0.15
CHKBQ9Y259 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC15.97■□□□□ 0.15
CHKBQ9Y259 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC15.97■□□□□ 0.15
CHKBQ9Y259 SDHAP3-202ENST00000515467 728 ntBASIC15.97■□□□□ 0.15
CHKBQ9Y259 RNA5SP421-201ENST00000516864 134 ntBASIC15.97■□□□□ 0.15
CHKBQ9Y259 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC15.97■□□□□ 0.15
CHKBQ9Y259 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15.97■□□□□ 0.15
CHKBQ9Y259 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC15.97■□□□□ 0.15
CHKBQ9Y259 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CHKBQ9Y259 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHKBQ9Y259 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CHKBQ9Y259 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.97■□□□□ 0.15
CHKBQ9Y259 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHKBQ9Y259 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHKBQ9Y259 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CHKBQ9Y259 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CHKBQ9Y259 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
CHKBQ9Y259 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms