Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
CDH9Q9ULB4 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC16.31■□□□□ 0.2
CDH9Q9ULB4 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC16.31■□□□□ 0.2
CDH9Q9ULB4 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDH9Q9ULB4 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC16.31■□□□□ 0.2
CDH9Q9ULB4 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDH9Q9ULB4 AL359881.2-201ENST00000602973 570 ntBASIC16.31■□□□□ 0.2
CDH9Q9ULB4 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC16.31■□□□□ 0.2
CDH9Q9ULB4 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH9Q9ULB4 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH9Q9ULB4 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CDH9Q9ULB4 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.31■□□□□ 0.2
CDH9Q9ULB4 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH9Q9ULB4 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.31■□□□□ 0.2
CDH9Q9ULB4 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH9Q9ULB4 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH9Q9ULB4 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH9Q9ULB4 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH9Q9ULB4 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.31■□□□□ 0.2
CDH9Q9ULB4 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDH9Q9ULB4 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC16.3■□□□□ 0.2
CDH9Q9ULB4 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDH9Q9ULB4 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDH9Q9ULB4 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDH9Q9ULB4 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDH9Q9ULB4 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CDH9Q9ULB4 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDH9Q9ULB4 ZBTB45P1-201ENST00000452761 1456 ntBASIC16.3■□□□□ 0.2
CDH9Q9ULB4 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDH9Q9ULB4 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDH9Q9ULB4 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.3■□□□□ 0.2
CDH9Q9ULB4 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDH9Q9ULB4 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDH9Q9ULB4 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDH9Q9ULB4 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.3■□□□□ 0.2
CDH9Q9ULB4 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDH9Q9ULB4 PKD1P5-201ENST00000532415 10291 ntBASIC16.3■□□□□ 0.2
CDH9Q9ULB4 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDH9Q9ULB4 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDH9Q9ULB4 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDH9Q9ULB4 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDH9Q9ULB4 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC16.3■□□□□ 0.2
CDH9Q9ULB4 ACTBP8-201ENST00000403258 1108 ntBASIC16.3■□□□□ 0.2
CDH9Q9ULB4 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDH9Q9ULB4 MIR1909-201ENST00000411312 80 ntBASIC16.3■□□□□ 0.2
CDH9Q9ULB4 GHSR-202ENST00000427970 912 ntBASIC16.3■□□□□ 0.2
CDH9Q9ULB4 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDH9Q9ULB4 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CDH9Q9ULB4 AC244107.1-201ENST00000442033 332 ntBASIC16.3■□□□□ 0.2
CDH9Q9ULB4 AC022210.1-201ENST00000449856 793 ntBASIC16.3■□□□□ 0.2
CDH9Q9ULB4 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC16.3■□□□□ 0.2
CDH9Q9ULB4 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDH9Q9ULB4 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
CDH9Q9ULB4 MIR6805-201ENST00000615055 62 ntBASIC16.3■□□□□ 0.2
CDH9Q9ULB4 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.3■□□□□ 0.2
CDH9Q9ULB4 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.3■□□□□ 0.2
CDH9Q9ULB4 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC16.3■□□□□ 0.2
CDH9Q9ULB4 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.3■□□□□ 0.2
CDH9Q9ULB4 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDH9Q9ULB4 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC16.3■□□□□ 0.2
CDH9Q9ULB4 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDH9Q9ULB4 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.3■□□□□ 0.2
CDH9Q9ULB4 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDH9Q9ULB4 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC16.3■□□□□ 0.2
CDH9Q9ULB4 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDH9Q9ULB4 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC16.3■□□□□ 0.2
CDH9Q9ULB4 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.3■□□□□ 0.2
CDH9Q9ULB4 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.3■□□□□ 0.2
CDH9Q9ULB4 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.3■□□□□ 0.2
CDH9Q9ULB4 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH9Q9ULB4 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH9Q9ULB4 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH9Q9ULB4 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
CDH9Q9ULB4 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC16.29■□□□□ 0.2
CDH9Q9ULB4 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDH9Q9ULB4 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDH9Q9ULB4 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CDH9Q9ULB4 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
CDH9Q9ULB4 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.29■□□□□ 0.2
CDH9Q9ULB4 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH9Q9ULB4 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDH9Q9ULB4 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.29■□□□□ 0.2
CDH9Q9ULB4 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CDH9Q9ULB4 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH9Q9ULB4 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH9Q9ULB4 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.29■□□□□ 0.2
CDH9Q9ULB4 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH9Q9ULB4 RPS15-201ENST00000233609 534 ntTSL 2 BASIC16.29■□□□□ 0.2
CDH9Q9ULB4 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH9Q9ULB4 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH9Q9ULB4 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH9Q9ULB4 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CDH9Q9ULB4 B9D1-203ENST00000395615 805 ntTSL 3 BASIC16.29■□□□□ 0.2
CDH9Q9ULB4 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC16.29■□□□□ 0.2
CDH9Q9ULB4 AL139094.1-201ENST00000405549 1188 ntBASIC16.29■□□□□ 0.2
CDH9Q9ULB4 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC16.29■□□□□ 0.2
CDH9Q9ULB4 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDH9Q9ULB4 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDH9Q9ULB4 AC016694.1-201ENST00000434179 700 ntBASIC16.29■□□□□ 0.2
CDH9Q9ULB4 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms