Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HDAC6Q9UBN7 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
HDAC6Q9UBN7 FAM86MP-201ENST00000340703 885 ntBASIC17.54■□□□□ 0.4
HDAC6Q9UBN7 RPF1-202ENST00000370656 724 ntTSL 2 BASIC17.54■□□□□ 0.4
HDAC6Q9UBN7 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HDAC6Q9UBN7 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HDAC6Q9UBN7 STX1A-203ENST00000395155 783 ntTSL 2 BASIC17.54■□□□□ 0.4
HDAC6Q9UBN7 AC136604.1-201ENST00000418535 575 ntBASIC17.54■□□□□ 0.4
HDAC6Q9UBN7 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HDAC6Q9UBN7 KLF2P4-201ENST00000451959 1225 ntBASIC17.54■□□□□ 0.4
HDAC6Q9UBN7 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC17.54■□□□□ 0.4
HDAC6Q9UBN7 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC17.54■□□□□ 0.4
HDAC6Q9UBN7 HNRNPUP1-201ENST00000554987 333 ntBASIC17.54■□□□□ 0.4
HDAC6Q9UBN7 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC17.54■□□□□ 0.4
HDAC6Q9UBN7 AL022328.1-201ENST00000610050 478 ntBASIC17.54■□□□□ 0.4
HDAC6Q9UBN7 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC17.54■□□□□ 0.4
HDAC6Q9UBN7 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HDAC6Q9UBN7 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HDAC6Q9UBN7 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HDAC6Q9UBN7 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HDAC6Q9UBN7 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
HDAC6Q9UBN7 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
HDAC6Q9UBN7 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
HDAC6Q9UBN7 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC17.54■□□□□ 0.4
HDAC6Q9UBN7 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
HDAC6Q9UBN7 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC17.54■□□□□ 0.4
HDAC6Q9UBN7 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC17.54■□□□□ 0.4
HDAC6Q9UBN7 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HDAC6Q9UBN7 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
HDAC6Q9UBN7 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
HDAC6Q9UBN7 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
HDAC6Q9UBN7 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HDAC6Q9UBN7 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
HDAC6Q9UBN7 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
HDAC6Q9UBN7 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC17.53■□□□□ 0.4
HDAC6Q9UBN7 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HDAC6Q9UBN7 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HDAC6Q9UBN7 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
HDAC6Q9UBN7 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC17.53■□□□□ 0.4
HDAC6Q9UBN7 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
HDAC6Q9UBN7 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HDAC6Q9UBN7 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HDAC6Q9UBN7 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC17.53■□□□□ 0.4
HDAC6Q9UBN7 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
HDAC6Q9UBN7 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
HDAC6Q9UBN7 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
HDAC6Q9UBN7 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
HDAC6Q9UBN7 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC17.53■□□□□ 0.4
HDAC6Q9UBN7 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC17.53■□□□□ 0.4
HDAC6Q9UBN7 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC17.53■□□□□ 0.4
HDAC6Q9UBN7 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
HDAC6Q9UBN7 RPL28-203ENST00000428193 573 ntTSL 2 BASIC17.53■□□□□ 0.4
HDAC6Q9UBN7 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HDAC6Q9UBN7 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC17.53■□□□□ 0.4
HDAC6Q9UBN7 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC17.53■□□□□ 0.4
HDAC6Q9UBN7 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
HDAC6Q9UBN7 ENPP7P5-201ENST00000541031 1031 ntBASIC17.53■□□□□ 0.4
HDAC6Q9UBN7 RPL28-207ENST00000558815 616 ntTSL 2 BASIC17.53■□□□□ 0.4
HDAC6Q9UBN7 AL049840.4-201ENST00000602422 811 ntBASIC17.53■□□□□ 0.4
HDAC6Q9UBN7 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HDAC6Q9UBN7 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
HDAC6Q9UBN7 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
HDAC6Q9UBN7 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HDAC6Q9UBN7 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
HDAC6Q9UBN7 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC17.53■□□□□ 0.4
HDAC6Q9UBN7 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC17.53■□□□□ 0.4
HDAC6Q9UBN7 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HDAC6Q9UBN7 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
HDAC6Q9UBN7 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
HDAC6Q9UBN7 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
HDAC6Q9UBN7 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC17.53■□□□□ 0.4
HDAC6Q9UBN7 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
HDAC6Q9UBN7 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
HDAC6Q9UBN7 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC17.53■□□□□ 0.4
HDAC6Q9UBN7 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
HDAC6Q9UBN7 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
HDAC6Q9UBN7 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HDAC6Q9UBN7 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
HDAC6Q9UBN7 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC17.53■□□□□ 0.4
HDAC6Q9UBN7 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
HDAC6Q9UBN7 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
HDAC6Q9UBN7 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HDAC6Q9UBN7 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
HDAC6Q9UBN7 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
HDAC6Q9UBN7 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC17.52■□□□□ 0.4
HDAC6Q9UBN7 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC17.52■□□□□ 0.4
HDAC6Q9UBN7 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HDAC6Q9UBN7 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
HDAC6Q9UBN7 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC17.52■□□□□ 0.4
HDAC6Q9UBN7 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
HDAC6Q9UBN7 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC17.52■□□□□ 0.4
HDAC6Q9UBN7 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC17.52■□□□□ 0.4
HDAC6Q9UBN7 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
HDAC6Q9UBN7 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
HDAC6Q9UBN7 SOCS2P1-201ENST00000417727 557 ntBASIC17.52■□□□□ 0.4
HDAC6Q9UBN7 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
HDAC6Q9UBN7 VDAC1P7-201ENST00000462417 847 ntBASIC17.52■□□□□ 0.4
HDAC6Q9UBN7 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
HDAC6Q9UBN7 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HDAC6Q9UBN7 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms