Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HMG20BQ9P0W2 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HMG20BQ9P0W2 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HMG20BQ9P0W2 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HMG20BQ9P0W2 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HMG20BQ9P0W2 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
HMG20BQ9P0W2 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
HMG20BQ9P0W2 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HMG20BQ9P0W2 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HMG20BQ9P0W2 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC18.81■□□□□ 0.6
HMG20BQ9P0W2 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HMG20BQ9P0W2 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
HMG20BQ9P0W2 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HMG20BQ9P0W2 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC18.8■□□□□ 0.6
HMG20BQ9P0W2 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HMG20BQ9P0W2 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
HMG20BQ9P0W2 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
HMG20BQ9P0W2 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HMG20BQ9P0W2 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HMG20BQ9P0W2 NME2-201ENST00000393183 568 ntTSL 2 BASIC18.8■□□□□ 0.6
HMG20BQ9P0W2 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
HMG20BQ9P0W2 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC18.8■□□□□ 0.6
HMG20BQ9P0W2 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
HMG20BQ9P0W2 PFN2-205ENST00000461868 613 ntTSL 2 BASIC18.8■□□□□ 0.6
HMG20BQ9P0W2 AC022137.2-201ENST00000503482 481 ntBASIC18.8■□□□□ 0.6
HMG20BQ9P0W2 AC106760.1-201ENST00000508690 800 ntBASIC18.8■□□□□ 0.6
HMG20BQ9P0W2 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC18.8■□□□□ 0.6
HMG20BQ9P0W2 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC18.8■□□□□ 0.6
HMG20BQ9P0W2 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HMG20BQ9P0W2 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
HMG20BQ9P0W2 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
HMG20BQ9P0W2 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
HMG20BQ9P0W2 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HMG20BQ9P0W2 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HMG20BQ9P0W2 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HMG20BQ9P0W2 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HMG20BQ9P0W2 BID-213ENST00000615414 2236 ntTSL 5 BASIC18.8■□□□□ 0.6
HMG20BQ9P0W2 STK33-217ENST00000534493 1895 ntTSL 2 BASIC18.8■□□□□ 0.6
HMG20BQ9P0W2 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HMG20BQ9P0W2 PDIA3P1-201ENST00000471856 1510 ntBASIC18.79■□□□□ 0.6
HMG20BQ9P0W2 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HMG20BQ9P0W2 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HMG20BQ9P0W2 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HMG20BQ9P0W2 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HMG20BQ9P0W2 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC18.79■□□□□ 0.6
HMG20BQ9P0W2 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HMG20BQ9P0W2 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HMG20BQ9P0W2 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HMG20BQ9P0W2 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
HMG20BQ9P0W2 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
HMG20BQ9P0W2 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC18.79■□□□□ 0.6
HMG20BQ9P0W2 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
HMG20BQ9P0W2 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
HMG20BQ9P0W2 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC18.79■□□□□ 0.6
HMG20BQ9P0W2 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC18.79■□□□□ 0.6
HMG20BQ9P0W2 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC18.79■□□□□ 0.6
HMG20BQ9P0W2 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
HMG20BQ9P0W2 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
HMG20BQ9P0W2 AC234783.1-201ENST00000441761 496 ntBASIC18.79■□□□□ 0.6
HMG20BQ9P0W2 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC18.79■□□□□ 0.6
HMG20BQ9P0W2 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HMG20BQ9P0W2 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HMG20BQ9P0W2 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC18.79■□□□□ 0.6
HMG20BQ9P0W2 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC18.79■□□□□ 0.6
HMG20BQ9P0W2 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
HMG20BQ9P0W2 AL022328.1-201ENST00000610050 478 ntBASIC18.79■□□□□ 0.6
HMG20BQ9P0W2 MIR6805-201ENST00000615055 62 ntBASIC18.79■□□□□ 0.6
HMG20BQ9P0W2 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
HMG20BQ9P0W2 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
HMG20BQ9P0W2 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
HMG20BQ9P0W2 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
HMG20BQ9P0W2 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HMG20BQ9P0W2 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
HMG20BQ9P0W2 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HMG20BQ9P0W2 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HMG20BQ9P0W2 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HMG20BQ9P0W2 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC18.79■□□□□ 0.6
HMG20BQ9P0W2 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
HMG20BQ9P0W2 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC18.79■□□□□ 0.6
HMG20BQ9P0W2 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HMG20BQ9P0W2 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HMG20BQ9P0W2 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
HMG20BQ9P0W2 AC112693.3-201ENST00000624819 1983 ntBASIC18.79■□□□□ 0.6
HMG20BQ9P0W2 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HMG20BQ9P0W2 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
HMG20BQ9P0W2 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC18.78■□□□□ 0.6
HMG20BQ9P0W2 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HMG20BQ9P0W2 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HMG20BQ9P0W2 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC18.78■□□□□ 0.6
HMG20BQ9P0W2 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC18.78■□□□□ 0.6
HMG20BQ9P0W2 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HMG20BQ9P0W2 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC18.78■□□□□ 0.6
HMG20BQ9P0W2 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
HMG20BQ9P0W2 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HMG20BQ9P0W2 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
HMG20BQ9P0W2 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HMG20BQ9P0W2 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HMG20BQ9P0W2 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
HMG20BQ9P0W2 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC18.78■□□□□ 0.6
HMG20BQ9P0W2 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms