Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC17.18■□□□□ 0.34
VTA1Q9NP79 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
VTA1Q9NP79 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
VTA1Q9NP79 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
VTA1Q9NP79 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
VTA1Q9NP79 SLC25A24P2-201ENST00000415059 510 ntBASIC17.18■□□□□ 0.34
VTA1Q9NP79 MDH2-205ENST00000461263 648 ntTSL 2 BASIC17.18■□□□□ 0.34
VTA1Q9NP79 ATP6V0CP2-201ENST00000469409 207 ntBASIC17.18■□□□□ 0.34
VTA1Q9NP79 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC17.18■□□□□ 0.34
VTA1Q9NP79 AP003171.2-201ENST00000528208 925 ntBASIC17.18■□□□□ 0.34
VTA1Q9NP79 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC17.18■□□□□ 0.34
VTA1Q9NP79 AC106820.3-201ENST00000561653 397 ntBASIC17.18■□□□□ 0.34
VTA1Q9NP79 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC17.18■□□□□ 0.34
VTA1Q9NP79 KLK11-210ENST00000600362 759 ntTSL 3 BASIC17.18■□□□□ 0.34
VTA1Q9NP79 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC17.18■□□□□ 0.34
VTA1Q9NP79 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC17.18■□□□□ 0.34
VTA1Q9NP79 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
VTA1Q9NP79 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC17.18■□□□□ 0.34
VTA1Q9NP79 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
VTA1Q9NP79 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
VTA1Q9NP79 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
VTA1Q9NP79 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.18■□□□□ 0.34
VTA1Q9NP79 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
VTA1Q9NP79 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
VTA1Q9NP79 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
VTA1Q9NP79 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
VTA1Q9NP79 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
VTA1Q9NP79 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
VTA1Q9NP79 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.18■□□□□ 0.34
VTA1Q9NP79 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.18■□□□□ 0.34
VTA1Q9NP79 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
VTA1Q9NP79 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
VTA1Q9NP79 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC17.17■□□□□ 0.34
VTA1Q9NP79 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
VTA1Q9NP79 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC17.17■□□□□ 0.34
VTA1Q9NP79 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
VTA1Q9NP79 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC17.17■□□□□ 0.34
VTA1Q9NP79 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
VTA1Q9NP79 AC092127.1-201ENST00000567093 3455 ntBASIC17.17■□□□□ 0.34
VTA1Q9NP79 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
VTA1Q9NP79 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
VTA1Q9NP79 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
VTA1Q9NP79 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC17.17■□□□□ 0.34
VTA1Q9NP79 HLA-K-203ENST00000430151 1046 ntBASIC17.17■□□□□ 0.34
VTA1Q9NP79 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC17.17■□□□□ 0.34
VTA1Q9NP79 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
VTA1Q9NP79 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC17.17■□□□□ 0.34
VTA1Q9NP79 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC17.17■□□□□ 0.34
VTA1Q9NP79 RNF41-210ENST00000552244 716 ntTSL 3 BASIC17.17■□□□□ 0.34
VTA1Q9NP79 DUX4L47-201ENST00000566374 394 ntBASIC17.17■□□□□ 0.34
VTA1Q9NP79 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC17.17■□□□□ 0.34
VTA1Q9NP79 NKG7-204ENST00000595217 816 ntTSL 2 BASIC17.17■□□□□ 0.34
VTA1Q9NP79 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
VTA1Q9NP79 PPA1-206ENST00000625364 644 ntTSL 5 BASIC17.17■□□□□ 0.34
VTA1Q9NP79 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
VTA1Q9NP79 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
VTA1Q9NP79 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
VTA1Q9NP79 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
VTA1Q9NP79 AC055811.4-201ENST00000624039 1754 ntBASIC17.17■□□□□ 0.34
VTA1Q9NP79 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
VTA1Q9NP79 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
VTA1Q9NP79 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
VTA1Q9NP79 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
VTA1Q9NP79 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
VTA1Q9NP79 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC17.16■□□□□ 0.34
VTA1Q9NP79 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
VTA1Q9NP79 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
VTA1Q9NP79 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC17.16■□□□□ 0.34
VTA1Q9NP79 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
VTA1Q9NP79 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
VTA1Q9NP79 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
VTA1Q9NP79 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
VTA1Q9NP79 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
VTA1Q9NP79 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
VTA1Q9NP79 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
VTA1Q9NP79 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
VTA1Q9NP79 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
VTA1Q9NP79 AC010491.1-201ENST00000563101 2797 ntBASIC17.16■□□□□ 0.34
VTA1Q9NP79 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
VTA1Q9NP79 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
VTA1Q9NP79 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
VTA1Q9NP79 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
VTA1Q9NP79 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
VTA1Q9NP79 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC17.16■□□□□ 0.34
VTA1Q9NP79 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC17.16■□□□□ 0.34
VTA1Q9NP79 FNTAP2-201ENST00000430308 634 ntBASIC17.16■□□□□ 0.34
VTA1Q9NP79 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC17.16■□□□□ 0.34
VTA1Q9NP79 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC17.16■□□□□ 0.34
VTA1Q9NP79 IGHJ2P-201ENST00000454480 60 ntBASIC17.16■□□□□ 0.34
VTA1Q9NP79 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC17.16■□□□□ 0.34
VTA1Q9NP79 ACTG1P17-201ENST00000558391 1119 ntBASIC17.16■□□□□ 0.34
VTA1Q9NP79 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC17.16■□□□□ 0.34
VTA1Q9NP79 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC17.16■□□□□ 0.34
VTA1Q9NP79 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC17.16■□□□□ 0.34
VTA1Q9NP79 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
VTA1Q9NP79 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC17.16■□□□□ 0.34
VTA1Q9NP79 AC138466.3-201ENST00000619983 221 ntBASIC17.16■□□□□ 0.34
VTA1Q9NP79 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
VTA1Q9NP79 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
VTA1Q9NP79 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms