Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
UPF2Q9HAU5 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC19.11■□□□□ 0.65
UPF2Q9HAU5 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UPF2Q9HAU5 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UPF2Q9HAU5 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC19.1■□□□□ 0.65
UPF2Q9HAU5 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UPF2Q9HAU5 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC19.1■□□□□ 0.65
UPF2Q9HAU5 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UPF2Q9HAU5 FOXO1B-201ENST00000504678 1527 ntBASIC19.1■□□□□ 0.65
UPF2Q9HAU5 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UPF2Q9HAU5 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
UPF2Q9HAU5 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
UPF2Q9HAU5 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
UPF2Q9HAU5 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
UPF2Q9HAU5 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
UPF2Q9HAU5 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UPF2Q9HAU5 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UPF2Q9HAU5 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
UPF2Q9HAU5 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UPF2Q9HAU5 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UPF2Q9HAU5 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
UPF2Q9HAU5 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
UPF2Q9HAU5 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UPF2Q9HAU5 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC19.1■□□□□ 0.65
UPF2Q9HAU5 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
UPF2Q9HAU5 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UPF2Q9HAU5 HNRNPUP1-201ENST00000554987 333 ntBASIC19.1■□□□□ 0.65
UPF2Q9HAU5 AC018845.2-201ENST00000568326 409 ntBASIC19.1■□□□□ 0.65
UPF2Q9HAU5 LITAF-211ENST00000572255 516 ntTSL 4 BASIC19.1■□□□□ 0.65
UPF2Q9HAU5 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
UPF2Q9HAU5 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC19.1■□□□□ 0.65
UPF2Q9HAU5 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
UPF2Q9HAU5 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC19.1■□□□□ 0.65
UPF2Q9HAU5 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC19.1■□□□□ 0.65
UPF2Q9HAU5 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UPF2Q9HAU5 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC19.1■□□□□ 0.65
UPF2Q9HAU5 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UPF2Q9HAU5 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UPF2Q9HAU5 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
UPF2Q9HAU5 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC19.1■□□□□ 0.65
UPF2Q9HAU5 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
UPF2Q9HAU5 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
UPF2Q9HAU5 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UPF2Q9HAU5 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC19.1■□□□□ 0.65
UPF2Q9HAU5 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
UPF2Q9HAU5 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
UPF2Q9HAU5 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
UPF2Q9HAU5 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
UPF2Q9HAU5 AC015656.1-201ENST00000624209 3578 ntBASIC19.09■□□□□ 0.65
UPF2Q9HAU5 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
UPF2Q9HAU5 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC19.09■□□□□ 0.65
UPF2Q9HAU5 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC19.09■□□□□ 0.65
UPF2Q9HAU5 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
UPF2Q9HAU5 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
UPF2Q9HAU5 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
UPF2Q9HAU5 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
UPF2Q9HAU5 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
UPF2Q9HAU5 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC19.09■□□□□ 0.65
UPF2Q9HAU5 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
UPF2Q9HAU5 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
UPF2Q9HAU5 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC19.09■□□□□ 0.65
UPF2Q9HAU5 FAM220BP-201ENST00000377689 816 ntBASIC19.09■□□□□ 0.65
UPF2Q9HAU5 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC19.09■□□□□ 0.65
UPF2Q9HAU5 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC19.09■□□□□ 0.65
UPF2Q9HAU5 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC19.09■□□□□ 0.65
UPF2Q9HAU5 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC19.09■□□□□ 0.65
UPF2Q9HAU5 AC074386.1-202ENST00000463561 864 ntBASIC19.09■□□□□ 0.65
UPF2Q9HAU5 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC19.09■□□□□ 0.65
UPF2Q9HAU5 IGHV3-22-201ENST00000520721 359 ntBASIC19.09■□□□□ 0.65
UPF2Q9HAU5 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC19.09■□□□□ 0.65
UPF2Q9HAU5 COQ9-214ENST00000567933 882 ntTSL 3 BASIC19.09■□□□□ 0.65
UPF2Q9HAU5 Z83851.2-201ENST00000609564 659 ntBASIC19.09■□□□□ 0.65
UPF2Q9HAU5 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
UPF2Q9HAU5 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
UPF2Q9HAU5 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
UPF2Q9HAU5 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
UPF2Q9HAU5 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC19.09■□□□□ 0.65
UPF2Q9HAU5 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC19.09■□□□□ 0.65
UPF2Q9HAU5 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC19.09■□□□□ 0.65
UPF2Q9HAU5 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
UPF2Q9HAU5 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
UPF2Q9HAU5 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
UPF2Q9HAU5 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
UPF2Q9HAU5 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
UPF2Q9HAU5 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
UPF2Q9HAU5 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
UPF2Q9HAU5 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
UPF2Q9HAU5 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
UPF2Q9HAU5 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC19.08■□□□□ 0.65
UPF2Q9HAU5 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
UPF2Q9HAU5 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
UPF2Q9HAU5 AKAP8P1-201ENST00000434743 1349 ntBASIC19.08■□□□□ 0.65
UPF2Q9HAU5 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
UPF2Q9HAU5 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC19.08■□□□□ 0.65
UPF2Q9HAU5 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
UPF2Q9HAU5 USP35-204ENST00000530267 2419 ntTSL 2 BASIC19.08■□□□□ 0.64
UPF2Q9HAU5 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
UPF2Q9HAU5 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
UPF2Q9HAU5 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
UPF2Q9HAU5 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms