Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 AL627223.1-201ENST00000416693 442 ntBASIC12.41□□□□□ -0.42
CHRDL1Q9BU40 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC12.41□□□□□ -0.42
CHRDL1Q9BU40 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CHRDL1Q9BU40 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CHRDL1Q9BU40 DHDH-204ENST00000523250 634 ntTSL 5 BASIC12.41□□□□□ -0.42
CHRDL1Q9BU40 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC12.41□□□□□ -0.42
CHRDL1Q9BU40 ALG1L8P-201ENST00000533887 760 ntBASIC12.41□□□□□ -0.42
CHRDL1Q9BU40 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CHRDL1Q9BU40 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC12.41□□□□□ -0.42
CHRDL1Q9BU40 MAX-210ENST00000555419 765 ntTSL 5 BASIC12.41□□□□□ -0.42
CHRDL1Q9BU40 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC12.41□□□□□ -0.42
CHRDL1Q9BU40 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC12.41□□□□□ -0.42
CHRDL1Q9BU40 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC12.41□□□□□ -0.42
CHRDL1Q9BU40 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC12.41□□□□□ -0.42
CHRDL1Q9BU40 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC12.41□□□□□ -0.42
CHRDL1Q9BU40 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CHRDL1Q9BU40 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CHRDL1Q9BU40 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC12.41□□□□□ -0.42
CHRDL1Q9BU40 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC12.41□□□□□ -0.42
CHRDL1Q9BU40 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
CHRDL1Q9BU40 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CHRDL1Q9BU40 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CHRDL1Q9BU40 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CHRDL1Q9BU40 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
CHRDL1Q9BU40 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CHRDL1Q9BU40 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
CHRDL1Q9BU40 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC12.41□□□□□ -0.42
CHRDL1Q9BU40 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
CHRDL1Q9BU40 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CHRDL1Q9BU40 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CHRDL1Q9BU40 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC12.41□□□□□ -0.42
CHRDL1Q9BU40 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC12.41□□□□□ -0.42
CHRDL1Q9BU40 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CHRDL1Q9BU40 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC12.41□□□□□ -0.42
CHRDL1Q9BU40 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
CHRDL1Q9BU40 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CHRDL1Q9BU40 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC12.41□□□□□ -0.42
CHRDL1Q9BU40 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CHRDL1Q9BU40 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CHRDL1Q9BU40 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
CHRDL1Q9BU40 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
CHRDL1Q9BU40 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC12.4□□□□□ -0.42
CHRDL1Q9BU40 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
CHRDL1Q9BU40 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC12.4□□□□□ -0.42
CHRDL1Q9BU40 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
CHRDL1Q9BU40 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CHRDL1Q9BU40 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CHRDL1Q9BU40 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC12.4□□□□□ -0.42
CHRDL1Q9BU40 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC12.4□□□□□ -0.42
CHRDL1Q9BU40 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CHRDL1Q9BU40 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
CHRDL1Q9BU40 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
CHRDL1Q9BU40 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC12.4□□□□□ -0.42
CHRDL1Q9BU40 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
CHRDL1Q9BU40 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CHRDL1Q9BU40 REXO1L1P-202ENST00000608646 1974 ntBASIC12.4□□□□□ -0.42
CHRDL1Q9BU40 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC12.4□□□□□ -0.42
CHRDL1Q9BU40 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CHRDL1Q9BU40 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC12.4□□□□□ -0.42
CHRDL1Q9BU40 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CHRDL1Q9BU40 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CHRDL1Q9BU40 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CHRDL1Q9BU40 AC004987.2-201ENST00000395959 1148 ntBASIC12.4□□□□□ -0.42
CHRDL1Q9BU40 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC12.4□□□□□ -0.42
CHRDL1Q9BU40 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC12.4□□□□□ -0.42
CHRDL1Q9BU40 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC12.4□□□□□ -0.42
CHRDL1Q9BU40 AL139010.1-201ENST00000454878 894 ntBASIC12.4□□□□□ -0.42
CHRDL1Q9BU40 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC12.4□□□□□ -0.42
CHRDL1Q9BU40 AP000344.2-201ENST00000512987 629 ntBASIC12.4□□□□□ -0.42
CHRDL1Q9BU40 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC12.4□□□□□ -0.42
CHRDL1Q9BU40 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CHRDL1Q9BU40 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC12.4□□□□□ -0.42
CHRDL1Q9BU40 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CHRDL1Q9BU40 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC12.4□□□□□ -0.42
CHRDL1Q9BU40 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC12.4□□□□□ -0.42
CHRDL1Q9BU40 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
CHRDL1Q9BU40 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CHRDL1Q9BU40 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC12.4□□□□□ -0.42
CHRDL1Q9BU40 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CHRDL1Q9BU40 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CHRDL1Q9BU40 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
CHRDL1Q9BU40 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC12.4□□□□□ -0.42
CHRDL1Q9BU40 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CHRDL1Q9BU40 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
CHRDL1Q9BU40 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC12.4□□□□□ -0.42
CHRDL1Q9BU40 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
CHRDL1Q9BU40 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
CHRDL1Q9BU40 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CHRDL1Q9BU40 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
CHRDL1Q9BU40 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CHRDL1Q9BU40 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CHRDL1Q9BU40 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.43
CHRDL1Q9BU40 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
CHRDL1Q9BU40 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.43
CHRDL1Q9BU40 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
CHRDL1Q9BU40 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
CHRDL1Q9BU40 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.43
CHRDL1Q9BU40 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC12.39□□□□□ -0.43
CHRDL1Q9BU40 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CHRDL1Q9BU40 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms