Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
HDHD3Q9BSH5 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.15□□□□□ -0.3
HDHD3Q9BSH5 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.15□□□□□ -0.3
HDHD3Q9BSH5 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.15□□□□□ -0.3
HDHD3Q9BSH5 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
HDHD3Q9BSH5 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC13.15□□□□□ -0.31
HDHD3Q9BSH5 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
HDHD3Q9BSH5 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
HDHD3Q9BSH5 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.31
HDHD3Q9BSH5 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
HDHD3Q9BSH5 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC13.14□□□□□ -0.31
HDHD3Q9BSH5 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HDHD3Q9BSH5 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
HDHD3Q9BSH5 TNN-203ENST00000622870 3719 ntTSL 5 BASIC13.14□□□□□ -0.31
HDHD3Q9BSH5 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HDHD3Q9BSH5 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HDHD3Q9BSH5 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
HDHD3Q9BSH5 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HDHD3Q9BSH5 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HDHD3Q9BSH5 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HDHD3Q9BSH5 AC097376.2-205ENST00000610159 5334 ntBASIC13.14□□□□□ -0.31
HDHD3Q9BSH5 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.14□□□□□ -0.31
HDHD3Q9BSH5 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
HDHD3Q9BSH5 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
HDHD3Q9BSH5 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HDHD3Q9BSH5 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
HDHD3Q9BSH5 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HDHD3Q9BSH5 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
HDHD3Q9BSH5 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
HDHD3Q9BSH5 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
HDHD3Q9BSH5 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
HDHD3Q9BSH5 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC13.14□□□□□ -0.31
HDHD3Q9BSH5 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
HDHD3Q9BSH5 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
HDHD3Q9BSH5 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
HDHD3Q9BSH5 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
HDHD3Q9BSH5 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
HDHD3Q9BSH5 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
HDHD3Q9BSH5 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.14□□□□□ -0.31
HDHD3Q9BSH5 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HDHD3Q9BSH5 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HDHD3Q9BSH5 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HDHD3Q9BSH5 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC13.14□□□□□ -0.31
HDHD3Q9BSH5 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HDHD3Q9BSH5 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HDHD3Q9BSH5 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.14□□□□□ -0.31
HDHD3Q9BSH5 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HDHD3Q9BSH5 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.14□□□□□ -0.31
HDHD3Q9BSH5 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
HDHD3Q9BSH5 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HDHD3Q9BSH5 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC13.14□□□□□ -0.31
HDHD3Q9BSH5 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HDHD3Q9BSH5 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HDHD3Q9BSH5 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
HDHD3Q9BSH5 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HDHD3Q9BSH5 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
HDHD3Q9BSH5 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HDHD3Q9BSH5 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
HDHD3Q9BSH5 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HDHD3Q9BSH5 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HDHD3Q9BSH5 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HDHD3Q9BSH5 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HDHD3Q9BSH5 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HDHD3Q9BSH5 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HDHD3Q9BSH5 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HDHD3Q9BSH5 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
HDHD3Q9BSH5 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.13□□□□□ -0.31
HDHD3Q9BSH5 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.13□□□□□ -0.31
HDHD3Q9BSH5 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HDHD3Q9BSH5 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HDHD3Q9BSH5 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HDHD3Q9BSH5 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.13□□□□□ -0.31
HDHD3Q9BSH5 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
HDHD3Q9BSH5 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HDHD3Q9BSH5 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
HDHD3Q9BSH5 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
HDHD3Q9BSH5 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
HDHD3Q9BSH5 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.13□□□□□ -0.31
HDHD3Q9BSH5 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HDHD3Q9BSH5 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.13□□□□□ -0.31
HDHD3Q9BSH5 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HDHD3Q9BSH5 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.13□□□□□ -0.31
HDHD3Q9BSH5 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
HDHD3Q9BSH5 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
HDHD3Q9BSH5 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HDHD3Q9BSH5 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC13.13□□□□□ -0.31
HDHD3Q9BSH5 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HDHD3Q9BSH5 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC13.13□□□□□ -0.31
HDHD3Q9BSH5 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HDHD3Q9BSH5 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
HDHD3Q9BSH5 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HDHD3Q9BSH5 CD81-202ENST00000381036 880 ntTSL 3 BASIC13.13□□□□□ -0.31
HDHD3Q9BSH5 MCCD1P2-201ENST00000423228 335 ntBASIC13.13□□□□□ -0.31
HDHD3Q9BSH5 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HDHD3Q9BSH5 ALG1L5P-201ENST00000482043 771 ntBASIC13.13□□□□□ -0.31
HDHD3Q9BSH5 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC13.13□□□□□ -0.31
HDHD3Q9BSH5 SUOX-214ENST00000551841 906 ntTSL 3 BASIC13.13□□□□□ -0.31
HDHD3Q9BSH5 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC13.13□□□□□ -0.31
HDHD3Q9BSH5 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
HDHD3Q9BSH5 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms