Protein–RNA interactions for Protein: Q9BQE3

TUBA1C, Tubulin alpha-1C chain, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1CQ9BQE3 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14.73□□□□□ -0.05
TUBA1CQ9BQE3 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
TUBA1CQ9BQE3 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
TUBA1CQ9BQE3 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.73□□□□□ -0.05
TUBA1CQ9BQE3 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TUBA1CQ9BQE3 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TUBA1CQ9BQE3 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TUBA1CQ9BQE3 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
TUBA1CQ9BQE3 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TUBA1CQ9BQE3 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
TUBA1CQ9BQE3 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TUBA1CQ9BQE3 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TUBA1CQ9BQE3 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.72□□□□□ -0.05
TUBA1CQ9BQE3 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TUBA1CQ9BQE3 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
TUBA1CQ9BQE3 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TUBA1CQ9BQE3 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TUBA1CQ9BQE3 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.72□□□□□ -0.05
TUBA1CQ9BQE3 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
TUBA1CQ9BQE3 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TUBA1CQ9BQE3 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.72□□□□□ -0.05
TUBA1CQ9BQE3 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TUBA1CQ9BQE3 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TUBA1CQ9BQE3 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TUBA1CQ9BQE3 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC14.72□□□□□ -0.05
TUBA1CQ9BQE3 WDR53-203ENST00000429115 683 ntTSL 2 BASIC14.72□□□□□ -0.05
TUBA1CQ9BQE3 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14.72□□□□□ -0.05
TUBA1CQ9BQE3 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC14.72□□□□□ -0.05
TUBA1CQ9BQE3 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.72□□□□□ -0.05
TUBA1CQ9BQE3 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.72□□□□□ -0.05
TUBA1CQ9BQE3 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC14.72□□□□□ -0.05
TUBA1CQ9BQE3 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC14.72□□□□□ -0.05
TUBA1CQ9BQE3 AC140878.1-201ENST00000565277 250 ntBASIC14.72□□□□□ -0.05
TUBA1CQ9BQE3 AC018529.1-201ENST00000613063 361 ntBASIC14.72□□□□□ -0.05
TUBA1CQ9BQE3 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
TUBA1CQ9BQE3 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TUBA1CQ9BQE3 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
TUBA1CQ9BQE3 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TUBA1CQ9BQE3 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TUBA1CQ9BQE3 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TUBA1CQ9BQE3 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TUBA1CQ9BQE3 REXO1L1P-202ENST00000608646 1974 ntBASIC14.72□□□□□ -0.05
TUBA1CQ9BQE3 OR2I1P-209ENST00000641730 5365 ntBASIC14.72□□□□□ -0.05
TUBA1CQ9BQE3 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.72□□□□□ -0.05
TUBA1CQ9BQE3 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC14.72□□□□□ -0.05
TUBA1CQ9BQE3 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.72□□□□□ -0.05
TUBA1CQ9BQE3 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.72□□□□□ -0.05
TUBA1CQ9BQE3 AC011477.6-201ENST00000604980 1927 ntBASIC14.72□□□□□ -0.05
TUBA1CQ9BQE3 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TUBA1CQ9BQE3 AC010327.5-201ENST00000586923 3061 ntBASIC14.72□□□□□ -0.05
TUBA1CQ9BQE3 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TUBA1CQ9BQE3 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TUBA1CQ9BQE3 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
TUBA1CQ9BQE3 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TUBA1CQ9BQE3 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TUBA1CQ9BQE3 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TUBA1CQ9BQE3 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
TUBA1CQ9BQE3 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
TUBA1CQ9BQE3 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TUBA1CQ9BQE3 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC14.71□□□□□ -0.05
TUBA1CQ9BQE3 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.05
TUBA1CQ9BQE3 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TUBA1CQ9BQE3 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
TUBA1CQ9BQE3 PPP1R26P4-201ENST00000619065 3527 ntBASIC14.71□□□□□ -0.05
TUBA1CQ9BQE3 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
TUBA1CQ9BQE3 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
TUBA1CQ9BQE3 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
TUBA1CQ9BQE3 HLA-H-201ENST00000383620 1096 ntBASIC14.71□□□□□ -0.05
TUBA1CQ9BQE3 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.71□□□□□ -0.05
TUBA1CQ9BQE3 TREML5P-201ENST00000421694 576 ntBASIC14.71□□□□□ -0.05
TUBA1CQ9BQE3 AC055876.3-201ENST00000431496 288 ntBASIC14.71□□□□□ -0.05
TUBA1CQ9BQE3 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC14.71□□□□□ -0.05
TUBA1CQ9BQE3 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC14.71□□□□□ -0.05
TUBA1CQ9BQE3 AC093214.1-201ENST00000511688 1107 ntBASIC14.71□□□□□ -0.05
TUBA1CQ9BQE3 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC14.71□□□□□ -0.05
TUBA1CQ9BQE3 SPCS2P1-201ENST00000561636 679 ntBASIC14.71□□□□□ -0.05
TUBA1CQ9BQE3 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
TUBA1CQ9BQE3 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC14.71□□□□□ -0.05
TUBA1CQ9BQE3 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC14.71□□□□□ -0.05
TUBA1CQ9BQE3 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC14.71□□□□□ -0.05
TUBA1CQ9BQE3 AC138649.4-201ENST00000612222 287 ntBASIC14.71□□□□□ -0.05
TUBA1CQ9BQE3 AC003101.2-201ENST00000612557 442 ntBASIC14.71□□□□□ -0.05
TUBA1CQ9BQE3 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TUBA1CQ9BQE3 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TUBA1CQ9BQE3 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
TUBA1CQ9BQE3 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC14.71□□□□□ -0.05
TUBA1CQ9BQE3 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TUBA1CQ9BQE3 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.71□□□□□ -0.05
TUBA1CQ9BQE3 AC140479.7-201ENST00000636301 2332 ntBASIC14.71□□□□□ -0.05
TUBA1CQ9BQE3 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.71□□□□□ -0.06
TUBA1CQ9BQE3 FO538757.1-201ENST00000623083 1397 ntBASIC14.71□□□□□ -0.06
TUBA1CQ9BQE3 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.71□□□□□ -0.06
TUBA1CQ9BQE3 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.06
TUBA1CQ9BQE3 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
TUBA1CQ9BQE3 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.7□□□□□ -0.06
TUBA1CQ9BQE3 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.7□□□□□ -0.06
TUBA1CQ9BQE3 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.7□□□□□ -0.06
TUBA1CQ9BQE3 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
TUBA1CQ9BQE3 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
TUBA1CQ9BQE3 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms